Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC4P56524 AC107027.3-201ENST00000565095 3473 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDAC4P56524 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
HDAC4P56524 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC4P56524 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC4P56524 RNA5SP123-201ENST00000363244 119 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 RNU6-304P-201ENST00000364855 107 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AL021331.1-201ENST00000402817 582 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 ATF1P1-201ENST00000406040 927 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 RNU6-584P-201ENST00000410350 95 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 RNA5SP345-201ENST00000410646 108 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 GTF2IP5-201ENST00000414608 731 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 CHEK2P3-201ENST00000416118 248 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 LINC01347-201ENST00000417964 355 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC4P56524 AC005189.1-201ENST00000431286 310 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC4P56524 VN1R54P-201ENST00000435210 1049 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 Z80107.1-201ENST00000436830 412 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 YWHAZP2-201ENST00000440317 728 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 RRM2P4-201ENST00000441721 562 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC4P56524 RPL23AP56-201ENST00000460778 453 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AL591473.1-201ENST00000464297 313 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.11□□□□□ -1.59
HDAC4P56524 AC010374.1-201ENST00000503762 1237 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.11□□□□□ -1.59
HDAC4P56524 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC4P56524 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.11□□□□□ -1.59
HDAC4P56524 OR5AZ1P-201ENST00000527448 943 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDAC4P56524 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC4P56524 CR383656.6-201ENST00000550518 394 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC4P56524 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC4P56524 AC011453.2-201ENST00000603737 729 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC069431.2-201ENST00000604149 1099 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC018618.2-201ENST00000604770 446 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC087783.2-201ENST00000605070 562 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC4P56524 VN1R9P-201ENST00000614184 867 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC4P56524 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.11□□□□□ -1.59
HDAC4P56524 AL022401.1-201ENST00000619498 108 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC019206.1-201ENST00000621938 425 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC015871.5-202ENST00000623252 701 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC007342.8-201ENST00000623278 678 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AL353662.3-201ENST00000625131 237 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HDAC4P56524 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
HDAC4P56524 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC4P56524 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.11□□□□□ -1.59
HDAC4P56524 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDAC4P56524 MAPK10-320ENST00000641462 6696 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 AC008758.3-201ENST00000507003 1829 ntBASIC5.11□□□□□ -1.59
HDAC4P56524 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HDAC4P56524 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDAC4P56524 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
HDAC4P56524 AC010329.2-201ENST00000595195 2737 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
HDAC4P56524 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.1□□□□□ -1.59
HDAC4P56524 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 ATP5F1P2-201ENST00000398143 760 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 RPL6P29-201ENST00000414863 865 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.1□□□□□ -1.59
HDAC4P56524 MTCO2P23-201ENST00000425216 680 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 AC097499.1-201ENST00000444277 208 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.1□□□□□ -1.59
HDAC4P56524 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.1□□□□□ -1.59
HDAC4P56524 RPL7P48-201ENST00000461513 746 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.1□□□□□ -1.59
HDAC4P56524 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.1□□□□□ -1.59
HDAC4P56524 HMGB3P16-201ENST00000508037 287 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 AC138938.1-201ENST00000515431 782 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.1□□□□□ -1.59
HDAC4P56524 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.1□□□□□ -1.59
HDAC4P56524 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.1□□□□□ -1.59
HDAC4P56524 GCSHP4-201ENST00000538792 439 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.1□□□□□ -1.59
HDAC4P56524 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.1□□□□□ -1.59
HDAC4P56524 AL049838.1-201ENST00000563647 981 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 RN7SL339P-201ENST00000580597 296 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.1□□□□□ -1.59
HDAC4P56524 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.1□□□□□ -1.59
HDAC4P56524 AC006116.5-201ENST00000591936 559 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 AC090525.3-201ENST00000605601 189 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 AC015914.2-201ENST00000618167 288 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.1□□□□□ -1.59
HDAC4P56524 AC091905.4-201ENST00000623432 202 ntBASIC5.1□□□□□ -1.59
HDAC4P56524 AC083865.1-201ENST00000636634 831 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms