Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RN7SKP145-201ENST00000363291 303 ntBASIC6.21□□□□□ -1.42
PMS1P54277 RNU5F-7P-201ENST00000363696 115 ntBASIC6.21□□□□□ -1.42
PMS1P54277 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 MTND1P21-201ENST00000412991 285 ntBASIC6.21□□□□□ -1.42
PMS1P54277 RPSAP35-201ENST00000413753 818 ntBASIC6.21□□□□□ -1.42
PMS1P54277 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.21□□□□□ -1.42
PMS1P54277 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.21□□□□□ -1.42
PMS1P54277 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PMS1P54277 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.21□□□□□ -1.42
PMS1P54277 LARP1BP3-201ENST00000437229 869 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AL512286.1-201ENST00000439244 400 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.21□□□□□ -1.42
PMS1P54277 EPS15P1-201ENST00000448836 336 ntBASIC6.21□□□□□ -1.42
PMS1P54277 SNORD125-201ENST00000459538 96 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AC010307.1-201ENST00000467206 836 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.21□□□□□ -1.42
PMS1P54277 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.21□□□□□ -1.42
PMS1P54277 AC008549.1-201ENST00000512900 643 ntBASIC6.21□□□□□ -1.42
PMS1P54277 TCP11X3P-202ENST00000514289 1254 ntBASIC6.21□□□□□ -1.42
PMS1P54277 RNA5SP135-201ENST00000517019 125 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 AC122688.1-201ENST00000541494 223 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.21□□□□□ -1.42
PMS1P54277 GTF2IP22-201ENST00000554443 182 ntBASIC6.21□□□□□ -1.42
PMS1P54277 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.21□□□□□ -1.42
PMS1P54277 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.21□□□□□ -1.42
PMS1P54277 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 MIR4260-201ENST00000583107 67 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.21□□□□□ -1.42
PMS1P54277 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.21□□□□□ -1.42
PMS1P54277 AL390816.3-201ENST00000604527 1066 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AC024560.3-201ENST00000608482 349 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AL451049.1-201ENST00000608672 497 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AC116651.1-201ENST00000609724 556 ntBASIC6.21□□□□□ -1.42
PMS1P54277 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.21□□□□□ -1.42
PMS1P54277 MIR6133-201ENST00000617057 108 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AP005431.1-201ENST00000618479 319 ntBASIC6.21□□□□□ -1.42
PMS1P54277 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 AC073593.1-201ENST00000624500 411 ntBASIC6.21□□□□□ -1.42
PMS1P54277 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.21□□□□□ -1.42
PMS1P54277 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PMS1P54277 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.21□□□□□ -1.42
PMS1P54277 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PMS1P54277 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PMS1P54277 AC239868.2-201ENST00000564237 4527 ntBASIC6.21□□□□□ -1.42
PMS1P54277 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.21□□□□□ -1.42
PMS1P54277 PABPC1P9-201ENST00000426076 1612 ntBASIC6.21□□□□□ -1.42
PMS1P54277 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PMS1P54277 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PMS1P54277 AC016745.2-201ENST00000608834 3443 ntBASIC6.21□□□□□ -1.42
PMS1P54277 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PMS1P54277 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PMS1P54277 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.2□□□□□ -1.42
PMS1P54277 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PMS1P54277 AC004520.1-201ENST00000608362 1413 ntBASIC6.2□□□□□ -1.42
PMS1P54277 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PMS1P54277 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.2□□□□□ -1.42
PMS1P54277 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PMS1P54277 RNA5SP514-201ENST00000363717 111 ntBASIC6.2□□□□□ -1.42
PMS1P54277 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PMS1P54277 ATG4AP1-201ENST00000416893 538 ntBASIC6.2□□□□□ -1.42
PMS1P54277 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.2□□□□□ -1.42
PMS1P54277 RPL7P4-203ENST00000430239 730 ntBASIC6.2□□□□□ -1.42
PMS1P54277 HMGB3P24-201ENST00000433260 622 ntBASIC6.2□□□□□ -1.42
PMS1P54277 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.2□□□□□ -1.42
PMS1P54277 LINC02210-201ENST00000444561 288 ntBASIC6.2□□□□□ -1.42
PMS1P54277 AL596266.1-201ENST00000448132 400 ntBASIC6.2□□□□□ -1.42
PMS1P54277 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.2□□□□□ -1.42
PMS1P54277 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.2□□□□□ -1.42
PMS1P54277 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 GLUD1P3-202ENST00000508551 200 ntBASIC6.2□□□□□ -1.42
PMS1P54277 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.2□□□□□ -1.42
PMS1P54277 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 NPM1P6-201ENST00000521088 871 ntBASIC6.2□□□□□ -1.42
PMS1P54277 AC024405.1-201ENST00000532521 1042 ntBASIC6.2□□□□□ -1.42
PMS1P54277 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.2□□□□□ -1.42
PMS1P54277 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.2□□□□□ -1.42
PMS1P54277 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.2□□□□□ -1.42
PMS1P54277 AC010487.1-201ENST00000594408 1172 ntBASIC6.2□□□□□ -1.42
PMS1P54277 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.2□□□□□ -1.42
PMS1P54277 AP004247.3-201ENST00000608682 624 ntBASIC6.2□□□□□ -1.42
PMS1P54277 AC007684.1-201ENST00000609671 477 ntBASIC6.2□□□□□ -1.42
PMS1P54277 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PMS1P54277 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PMS1P54277 OR4F13P-202ENST00000560066 2054 ntBASIC6.2□□□□□ -1.42
PMS1P54277 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PMS1P54277 AC107982.1-201ENST00000507171 1300 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms