Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.34□□□□□ -1.55
COPB1P53618 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.34□□□□□ -1.56
COPB1P53618 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
COPB1P53618 AL359922.3-201ENST00000624779 1670 ntBASIC5.34□□□□□ -1.56
COPB1P53618 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COPB1P53618 CASC19-281ENST00000642118 1554 ntBASIC5.33□□□□□ -1.56
COPB1P53618 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COPB1P53618 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COPB1P53618 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COPB1P53618 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COPB1P53618 RNU6-1242P-201ENST00000391052 103 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AL034403.1-201ENST00000399414 885 ntBASIC5.33□□□□□ -1.56
COPB1P53618 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.33□□□□□ -1.56
COPB1P53618 RNA5SP345-201ENST00000410646 108 ntBASIC5.33□□□□□ -1.56
COPB1P53618 UBE2V1P11-201ENST00000411559 285 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AC002524.1-201ENST00000411687 547 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 AC092638.1-201ENST00000411966 1275 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 AF186996.5-201ENST00000418098 904 ntBASIC5.33□□□□□ -1.56
COPB1P53618 MTCO3P4-201ENST00000419236 787 ntBASIC5.33□□□□□ -1.56
COPB1P53618 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.33□□□□□ -1.56
COPB1P53618 PA2G4P6-201ENST00000438325 1197 ntBASIC5.33□□□□□ -1.56
COPB1P53618 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.33□□□□□ -1.56
COPB1P53618 SEPT14P24-201ENST00000447236 180 ntBASIC5.33□□□□□ -1.56
COPB1P53618 TRY2P-201ENST00000448860 689 ntBASIC5.33□□□□□ -1.56
COPB1P53618 FAR2P1-206ENST00000449736 709 ntBASIC5.33□□□□□ -1.56
COPB1P53618 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.33□□□□□ -1.56
COPB1P53618 RPS20P4-201ENST00000461659 355 ntBASIC5.33□□□□□ -1.56
COPB1P53618 RN7SL329P-201ENST00000467740 299 ntBASIC5.33□□□□□ -1.56
COPB1P53618 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.33□□□□□ -1.56
COPB1P53618 RN7SL97P-201ENST00000486780 299 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 RN7SL244P-201ENST00000493405 297 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AC117522.2-201ENST00000510049 657 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.33□□□□□ -1.56
COPB1P53618 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COPB1P53618 AC135279.1-201ENST00000543493 504 ntBASIC5.33□□□□□ -1.56
COPB1P53618 HMGN2P6-201ENST00000551091 273 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.33□□□□□ -1.56
COPB1P53618 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.33□□□□□ -1.56
COPB1P53618 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.33□□□□□ -1.56
COPB1P53618 SNORA74C-1-201ENST00000580726 201 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.33□□□□□ -1.56
COPB1P53618 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.33□□□□□ -1.56
COPB1P53618 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.33□□□□□ -1.56
COPB1P53618 TAS2R6P-201ENST00000605022 826 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.33□□□□□ -1.56
COPB1P53618 AC123767.1-202ENST00000620407 817 ntBASIC5.33□□□□□ -1.56
COPB1P53618 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COPB1P53618 AC090897.3-201ENST00000636973 1157 ntBASIC5.33□□□□□ -1.56
COPB1P53618 AC068137.4-201ENST00000638485 296 ntBASIC5.33□□□□□ -1.56
COPB1P53618 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.33□□□□□ -1.56
COPB1P53618 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
COPB1P53618 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
COPB1P53618 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.33□□□□□ -1.56
COPB1P53618 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
COPB1P53618 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COPB1P53618 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COPB1P53618 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COPB1P53618 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
COPB1P53618 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
COPB1P53618 MTND5P31-201ENST00000419366 1374 ntBASIC5.32□□□□□ -1.56
COPB1P53618 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COPB1P53618 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COPB1P53618 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COPB1P53618 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
COPB1P53618 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COPB1P53618 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COPB1P53618 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COPB1P53618 RNU4-68P-201ENST00000364314 141 ntBASIC5.32□□□□□ -1.56
COPB1P53618 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COPB1P53618 AL133270.1-201ENST00000402635 279 ntBASIC5.32□□□□□ -1.56
COPB1P53618 RPL7P27-201ENST00000403775 720 ntBASIC5.32□□□□□ -1.56
COPB1P53618 RN7SKP213-201ENST00000410746 298 ntBASIC5.32□□□□□ -1.56
COPB1P53618 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.32□□□□□ -1.56
COPB1P53618 AL513175.2-201ENST00000422071 443 ntBASIC5.32□□□□□ -1.56
COPB1P53618 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COPB1P53618 AC084290.1-201ENST00000434995 374 ntBASIC5.32□□□□□ -1.56
COPB1P53618 AL117351.1-201ENST00000438864 766 ntBASIC5.32□□□□□ -1.56
COPB1P53618 PTGES3P1-201ENST00000439531 483 ntBASIC5.32□□□□□ -1.56
COPB1P53618 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.32□□□□□ -1.56
COPB1P53618 OTX2P1-201ENST00000450956 354 ntBASIC5.32□□□□□ -1.56
COPB1P53618 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.32□□□□□ -1.56
COPB1P53618 RN7SL558P-201ENST00000497468 299 ntBASIC5.32□□□□□ -1.56
COPB1P53618 AC231760.1-201ENST00000498002 260 ntBASIC5.32□□□□□ -1.56
COPB1P53618 BTG4P1-201ENST00000510421 183 ntBASIC5.32□□□□□ -1.56
COPB1P53618 AC108120.2-201ENST00000512973 294 ntBASIC5.32□□□□□ -1.56
COPB1P53618 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.32□□□□□ -1.56
COPB1P53618 NDUFS5P6-201ENST00000529136 295 ntBASIC5.32□□□□□ -1.56
COPB1P53618 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms