Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 RN7SKP265-201ENST00000516448 223 ntBASIC5.44□□□□□ -1.54
NEK3P51956 RN7SKP82-201ENST00000516786 223 ntBASIC5.44□□□□□ -1.54
NEK3P51956 OR10G5P-201ENST00000532733 358 ntBASIC5.44□□□□□ -1.54
NEK3P51956 HAUS8P1-201ENST00000549005 542 ntBASIC5.44□□□□□ -1.54
NEK3P51956 AC068446.3-201ENST00000555285 382 ntBASIC5.44□□□□□ -1.54
NEK3P51956 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.44□□□□□ -1.54
NEK3P51956 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.44□□□□□ -1.54
NEK3P51956 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.44□□□□□ -1.54
NEK3P51956 AGGF1P6-201ENST00000569213 976 ntBASIC5.44□□□□□ -1.54
NEK3P51956 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.44□□□□□ -1.54
NEK3P51956 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.44□□□□□ -1.54
NEK3P51956 AC127024.5-201ENST00000580085 462 ntBASIC5.44□□□□□ -1.54
NEK3P51956 AC011477.5-201ENST00000586571 259 ntBASIC5.44□□□□□ -1.54
NEK3P51956 VN1R83P-201ENST00000595685 445 ntBASIC5.44□□□□□ -1.54
NEK3P51956 AL390816.3-201ENST00000604527 1066 ntBASIC5.44□□□□□ -1.54
NEK3P51956 AC244107.2-201ENST00000611773 76 ntBASIC5.44□□□□□ -1.54
NEK3P51956 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 AC109583.2-201ENST00000617367 129 ntBASIC5.44□□□□□ -1.54
NEK3P51956 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.44□□□□□ -1.54
NEK3P51956 MIR6719-201ENST00000622428 87 ntBASIC5.44□□□□□ -1.54
NEK3P51956 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEK3P51956 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NEK3P51956 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEK3P51956 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
NEK3P51956 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEK3P51956 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEK3P51956 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NEK3P51956 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
NEK3P51956 DDX18P3-201ENST00000404856 2007 ntBASIC5.43□□□□□ -1.54
NEK3P51956 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NEK3P51956 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
NEK3P51956 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NEK3P51956 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.43□□□□□ -1.54
NEK3P51956 RN7SKP97-201ENST00000410966 333 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AL450992.3-201ENST00000413192 568 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AC004022.2-201ENST00000413824 193 ntBASIC5.43□□□□□ -1.54
NEK3P51956 PCNPP4-201ENST00000414817 517 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.43□□□□□ -1.54
NEK3P51956 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 RPL30P3-201ENST00000424262 333 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.43□□□□□ -1.54
NEK3P51956 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.43□□□□□ -1.54
NEK3P51956 OR52B5P-201ENST00000435337 951 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.43□□□□□ -1.54
NEK3P51956 HMGB1P16-201ENST00000447155 540 ntBASIC5.43□□□□□ -1.54
NEK3P51956 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.43□□□□□ -1.54
NEK3P51956 Z99714.1-201ENST00000450463 807 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AC245028.2-201ENST00000458673 253 ntBASIC5.43□□□□□ -1.54
NEK3P51956 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.43□□□□□ -1.54
NEK3P51956 RN7SL727P-201ENST00000482164 296 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AC072052.1-201ENST00000496556 306 ntBASIC5.43□□□□□ -1.54
NEK3P51956 OR5M2P-201ENST00000529003 936 ntBASIC5.43□□□□□ -1.54
NEK3P51956 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.43□□□□□ -1.54
NEK3P51956 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.43□□□□□ -1.54
NEK3P51956 RPL10P14-201ENST00000565265 298 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NEK3P51956 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.43□□□□□ -1.54
NEK3P51956 AC069545.1-201ENST00000605671 358 ntBASIC5.43□□□□□ -1.54
NEK3P51956 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.43□□□□□ -1.54
NEK3P51956 AC211433.2-201ENST00000608433 387 ntBASIC5.43□□□□□ -1.54
NEK3P51956 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.43□□□□□ -1.54
NEK3P51956 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.43□□□□□ -1.54
NEK3P51956 OR52B5P-202ENST00000641118 1110 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AL731532.2-201ENST00000623542 1953 ntBASIC5.43□□□□□ -1.54
NEK3P51956 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.43□□□□□ -1.54
NEK3P51956 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.43□□□□□ -1.54
NEK3P51956 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.43□□□□□ -1.54
NEK3P51956 AL592437.2-201ENST00000421655 2434 ntBASIC5.43□□□□□ -1.54
NEK3P51956 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEK3P51956 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 BTBD10P1-201ENST00000549824 1352 ntBASIC5.42□□□□□ -1.54
NEK3P51956 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.42□□□□□ -1.54
NEK3P51956 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.42□□□□□ -1.54
NEK3P51956 RNU1-19P-201ENST00000363306 165 ntBASIC5.42□□□□□ -1.54
NEK3P51956 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.42□□□□□ -1.54
NEK3P51956 SNORA40.2-201ENST00000390847 128 ntBASIC5.42□□□□□ -1.54
NEK3P51956 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms