Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
MRE11P49959 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 SNORD113-6-201ENST00000363345 75 ntBASIC6.14□□□□□ -1.43
MRE11P49959 RNA5SP500-201ENST00000364486 119 ntBASIC6.14□□□□□ -1.43
MRE11P49959 SNORA62-201ENST00000365493 153 ntBASIC6.14□□□□□ -1.43
MRE11P49959 U6.112-201ENST00000384129 70 ntBASIC6.14□□□□□ -1.43
MRE11P49959 MIR137-201ENST00000385223 102 ntBASIC6.14□□□□□ -1.43
MRE11P49959 SNORD65-201ENST00000391079 73 ntBASIC6.14□□□□□ -1.43
MRE11P49959 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.14□□□□□ -1.43
MRE11P49959 HMGB1P20-201ENST00000402555 677 ntBASIC6.14□□□□□ -1.43
MRE11P49959 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.14□□□□□ -1.43
MRE11P49959 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.14□□□□□ -1.43
MRE11P49959 AL356320.2-201ENST00000417263 507 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.14□□□□□ -1.43
MRE11P49959 ELOCP9-201ENST00000418624 239 ntBASIC6.14□□□□□ -1.43
MRE11P49959 RPS26P13-201ENST00000419030 330 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 AL662874.1-201ENST00000426065 230 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.14□□□□□ -1.43
MRE11P49959 PTGES3P1-201ENST00000439531 483 ntBASIC6.14□□□□□ -1.43
MRE11P49959 ARAFP2-201ENST00000440565 559 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 RPS29P33-201ENST00000456717 146 ntBASIC6.14□□□□□ -1.43
MRE11P49959 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 RN7SL583P-201ENST00000475692 287 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 RPF2P2-201ENST00000504693 896 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 RN7SKP34-201ENST00000516142 244 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 AP003461.1-201ENST00000528866 78 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AC008015.1-201ENST00000555505 465 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AC090888.1-201ENST00000561335 1141 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.14□□□□□ -1.43
MRE11P49959 AL354943.1-201ENST00000572103 781 ntBASIC6.14□□□□□ -1.43
MRE11P49959 MTND4LP24-201ENST00000572277 291 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 AC087752.4-201ENST00000605911 462 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AL138478.1-201ENST00000612252 832 ntBASIC6.14□□□□□ -1.43
MRE11P49959 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 AC008115.3-201ENST00000614874 549 ntBASIC6.14□□□□□ -1.43
MRE11P49959 MIR8069-1-201ENST00000616627 86 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AC005840.5-201ENST00000619166 599 ntBASIC6.14□□□□□ -1.43
MRE11P49959 MIR8069-2-201ENST00000621412 86 ntBASIC6.14□□□□□ -1.43
MRE11P49959 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.14□□□□□ -1.43
MRE11P49959 AC139713.2-210ENST00000641741 992 ntBASIC6.14□□□□□ -1.43
MRE11P49959 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
MRE11P49959 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 AL132640.2-201ENST00000559968 1698 ntBASIC6.14□□□□□ -1.43
MRE11P49959 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
MRE11P49959 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MRE11P49959 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
MRE11P49959 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
MRE11P49959 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.13□□□□□ -1.43
MRE11P49959 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.13□□□□□ -1.43
MRE11P49959 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MRE11P49959 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MRE11P49959 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MRE11P49959 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
MRE11P49959 U8.4-201ENST00000363626 134 ntBASIC6.13□□□□□ -1.43
MRE11P49959 RNA5SP394-201ENST00000364216 119 ntBASIC6.13□□□□□ -1.43
MRE11P49959 XKRYP4-201ENST00000414395 483 ntBASIC6.13□□□□□ -1.43
MRE11P49959 RPL17P36-201ENST00000420302 549 ntBASIC6.13□□□□□ -1.43
MRE11P49959 AL049745.1-201ENST00000433953 286 ntBASIC6.13□□□□□ -1.43
MRE11P49959 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.13□□□□□ -1.43
MRE11P49959 TRY2P-201ENST00000448860 689 ntBASIC6.13□□□□□ -1.43
MRE11P49959 XKRYP5-201ENST00000449659 483 ntBASIC6.13□□□□□ -1.43
MRE11P49959 CYCSP42-201ENST00000450823 238 ntBASIC6.13□□□□□ -1.43
MRE11P49959 AC093166.4-201ENST00000457867 318 ntBASIC6.13□□□□□ -1.43
MRE11P49959 AC112206.1-201ENST00000468416 477 ntBASIC6.13□□□□□ -1.43
MRE11P49959 AC098583.1-201ENST00000480875 255 ntBASIC6.13□□□□□ -1.43
MRE11P49959 AC111000.2-201ENST00000507775 550 ntBASIC6.13□□□□□ -1.43
MRE11P49959 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MRE11P49959 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.13□□□□□ -1.43
MRE11P49959 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
MRE11P49959 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.13□□□□□ -1.43
MRE11P49959 MTCYBP20-201ENST00000524239 1129 ntBASIC6.13□□□□□ -1.43
MRE11P49959 AP001922.4-201ENST00000526967 290 ntBASIC6.13□□□□□ -1.43
MRE11P49959 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms