Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CX3CR1P49238 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CR1P49238 CPHL1P-201ENST00000461341 3407 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
CX3CR1P49238 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CR1P49238 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CX3CR1P49238 MIR93-201ENST00000385024 80 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 SDHCP2-201ENST00000398565 501 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.93□□□□□ -1.78
CX3CR1P49238 SKP1P3-201ENST00000429280 487 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 NDUFA5P1-201ENST00000433858 341 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CR1P49238 VN1R32P-201ENST00000452234 905 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CR1P49238 AC092905.1-201ENST00000467527 949 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CR1P49238 AC008897.1-201ENST00000494006 347 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CR1P49238 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CR1P49238 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CR1P49238 OR7H2P-201ENST00000513483 306 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC015795.1-201ENST00000513669 327 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CR1P49238 AC016550.3-201ENST00000515706 767 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 SNORD116-26-201ENST00000516006 96 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CR1P49238 HNRNPCP4-201ENST00000571636 900 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CR1P49238 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CR1P49238 OR1AB1P-201ENST00000585564 761 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 BNIP3P32-201ENST00000600015 554 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC013244.1-201ENST00000604279 193 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC007423.1-201ENST00000605009 627 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC135803.1-201ENST00000608748 565 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC055764.2-201ENST00000610089 670 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC243654.2-201ENST00000612843 443 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC007342.8-201ENST00000623278 678 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 CFTRP2-201ENST00000634304 199 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
CX3CR1P49238 OR2L1P-202ENST00000641567 1023 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 LINC01808-202ENST00000641680 1116 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CR1P49238 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CR1P49238 CCT8P1-201ENST00000413611 1657 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CR1P49238 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CX3CR1P49238 AC125257.1-201ENST00000560400 2930 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AL592182.3-201ENST00000642132 3304 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 AC105074.1-201ENST00000623380 3095 ntBASIC3.93□□□□□ -1.78
CX3CR1P49238 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CR1P49238 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CR1P49238 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CR1P49238 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CR1P49238 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CX3CR1P49238 MTND4P26-201ENST00000415971 1359 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 AC096656.1-201ENST00000623826 1364 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 AC007342.9-201ENST00000623877 1385 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CX3CR1P49238 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CR1P49238 RNA5SP22-201ENST00000365393 109 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 RHOT1P2-201ENST00000366423 333 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CR1P49238 ATP5F1P2-201ENST00000398143 760 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 RPS27AP11-201ENST00000402798 447 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 AL078604.1-201ENST00000404609 466 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 RPL31P52-201ENST00000407532 367 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 RN7SKP106-201ENST00000410832 272 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 RN7SKP167-201ENST00000411047 285 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CR1P49238 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CR1P49238 UBTFL3-201ENST00000418934 1024 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CR1P49238 CDY14P-201ENST00000431260 1014 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CR1P49238 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CR1P49238 RPL12P3-201ENST00000440080 396 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 CDY12P-201ENST00000440679 1015 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CR1P49238 AC023512.1-201ENST00000444513 499 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 CDY13P-201ENST00000445813 1015 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CR1P49238 MORF4L1P4-201ENST00000450245 976 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 CDY23P-201ENST00000451661 1014 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 AC012671.1-201ENST00000451912 203 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 DDX39BP2-208ENST00000453923 258 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CR1P49238 AP002345.1-201ENST00000456493 928 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CR1P49238 AC092324.1-201ENST00000468671 324 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 UBTFL6-201ENST00000477929 1024 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 AC083982.1-201ENST00000485679 344 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CR1P49238 AC108120.2-201ENST00000512973 294 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 NDUFB4P12-201ENST00000513465 390 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 RNA5SP497-201ENST00000516081 97 ntBASIC3.92□□□□□ -1.78
CX3CR1P49238 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CR1P49238 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CR1P49238 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms