Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
RXRGP48443 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RXRGP48443 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RXRGP48443 OR4K17-201ENST00000315543 1032 ntBASIC5.11□□□□□ -1.59
RXRGP48443 RNA5SP90-201ENST00000364801 99 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC007618.1-201ENST00000366455 732 ntBASIC5.11□□□□□ -1.59
RXRGP48443 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RXRGP48443 SNORD65C-201ENST00000390962 71 ntBASIC5.11□□□□□ -1.59
RXRGP48443 RNU6-932P-201ENST00000391108 106 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AL035405.1-201ENST00000400795 710 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC004022.2-201ENST00000413824 193 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.11□□□□□ -1.59
RXRGP48443 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.11□□□□□ -1.59
RXRGP48443 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.11□□□□□ -1.59
RXRGP48443 AC115285.1-201ENST00000424879 736 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.11□□□□□ -1.59
RXRGP48443 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 RPS29P10-201ENST00000439197 166 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RXRGP48443 PRPF38AP1-201ENST00000451976 933 ntBASIC5.11□□□□□ -1.59
RXRGP48443 Z95152.1-201ENST00000453556 656 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC008280.2-201ENST00000455473 307 ntBASIC5.11□□□□□ -1.59
RXRGP48443 RPL7P32-201ENST00000457119 744 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC073522.1-201ENST00000483312 377 ntBASIC5.11□□□□□ -1.59
RXRGP48443 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RXRGP48443 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.11□□□□□ -1.59
RXRGP48443 HMGB1P21-201ENST00000502313 581 ntBASIC5.11□□□□□ -1.59
RXRGP48443 IGBP1P4-201ENST00000503202 879 ntBASIC5.11□□□□□ -1.59
RXRGP48443 MYL12BP2-201ENST00000503948 512 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 AC008885.2-201ENST00000509506 930 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC108043.1-201ENST00000512696 574 ntBASIC5.11□□□□□ -1.59
RXRGP48443 HMGN1P9-201ENST00000515212 298 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.11□□□□□ -1.59
RXRGP48443 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.11□□□□□ -1.59
RXRGP48443 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RXRGP48443 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.11□□□□□ -1.59
RXRGP48443 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRGP48443 RN7SL622P-201ENST00000585292 275 ntBASIC5.11□□□□□ -1.59
RXRGP48443 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 AC108738.1-201ENST00000603703 237 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC005156.1-201ENST00000613371 573 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC253576.2-201ENST00000618815 580 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 AC087385.3-201ENST00000620477 187 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AP006248.2-201ENST00000623309 592 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AL109659.3-201ENST00000624985 950 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 AC106858.1-201ENST00000637497 429 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 AC006927.2-201ENST00000639256 389 ntBASIC5.11□□□□□ -1.59
RXRGP48443 LINC01808-202ENST00000641680 1116 ntBASIC5.11□□□□□ -1.59
RXRGP48443 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.11□□□□□ -1.59
RXRGP48443 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.11□□□□□ -1.59
RXRGP48443 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RXRGP48443 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RXRGP48443 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RXRGP48443 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RXRGP48443 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RXRGP48443 AL731566.1-201ENST00000620490 1937 ntBASIC5.11□□□□□ -1.59
RXRGP48443 AP000542.2-201ENST00000623199 6179 ntBASIC5.11□□□□□ -1.59
RXRGP48443 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RXRGP48443 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.1□□□□□ -1.59
RXRGP48443 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRGP48443 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
RXRGP48443 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRGP48443 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRGP48443 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RXRGP48443 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRGP48443 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.1□□□□□ -1.59
RXRGP48443 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRGP48443 RNA5SP391-201ENST00000363456 119 ntBASIC5.1□□□□□ -1.59
RXRGP48443 RN7SKP153-201ENST00000365026 316 ntBASIC5.1□□□□□ -1.59
RXRGP48443 RNU6-207P-201ENST00000384137 107 ntBASIC5.1□□□□□ -1.59
RXRGP48443 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RXRGP48443 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.1□□□□□ -1.59
RXRGP48443 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RXRGP48443 TMSB4XP8-201ENST00000402089 135 ntBASIC5.1□□□□□ -1.59
RXRGP48443 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RXRGP48443 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.1□□□□□ -1.59
RXRGP48443 RNU6-272P-201ENST00000411028 104 ntBASIC5.1□□□□□ -1.59
RXRGP48443 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.1□□□□□ -1.59
RXRGP48443 AC007738.1-201ENST00000413892 348 ntBASIC5.1□□□□□ -1.59
RXRGP48443 TMSB4XP6-201ENST00000415187 135 ntBASIC5.1□□□□□ -1.59
RXRGP48443 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RXRGP48443 OR2AM1P-201ENST00000422137 422 ntBASIC5.1□□□□□ -1.59
RXRGP48443 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
RXRGP48443 TMSB4XP1-201ENST00000424567 135 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms