Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5□□□□□ -1.61
MTHFRP42898 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5□□□□□ -1.61
MTHFRP42898 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5□□□□□ -1.61
MTHFRP42898 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5□□□□□ -1.61
MTHFRP42898 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MTHFRP42898 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5□□□□□ -1.61
MTHFRP42898 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5□□□□□ -1.61
MTHFRP42898 LINC00993-201ENST00000420453 540 ntBASIC5□□□□□ -1.61
MTHFRP42898 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5□□□□□ -1.61
MTHFRP42898 DPY19L1P2-201ENST00000426647 915 ntBASIC5□□□□□ -1.61
MTHFRP42898 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5□□□□□ -1.61
MTHFRP42898 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5□□□□□ -1.61
MTHFRP42898 GTF3AP5-201ENST00000442645 697 ntBASIC5□□□□□ -1.61
MTHFRP42898 GEMIN8P3-201ENST00000445417 720 ntBASIC5□□□□□ -1.61
MTHFRP42898 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5□□□□□ -1.61
MTHFRP42898 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5□□□□□ -1.61
MTHFRP42898 RPL23AP73-201ENST00000492507 471 ntBASIC5□□□□□ -1.61
MTHFRP42898 EEF1A1P25-201ENST00000495704 1267 ntBASIC5□□□□□ -1.61
MTHFRP42898 AC025674.1-201ENST00000507074 324 ntBASIC5□□□□□ -1.61
MTHFRP42898 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5□□□□□ -1.61
MTHFRP42898 AC026402.1-201ENST00000513642 170 ntBASIC5□□□□□ -1.61
MTHFRP42898 Y_RNA.719-201ENST00000517156 106 ntBASIC5□□□□□ -1.61
MTHFRP42898 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 OR4R2P-201ENST00000530815 597 ntBASIC5□□□□□ -1.61
MTHFRP42898 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5□□□□□ -1.61
MTHFRP42898 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5□□□□□ -1.61
MTHFRP42898 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5□□□□□ -1.61
MTHFRP42898 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5□□□□□ -1.61
MTHFRP42898 AC079148.1-201ENST00000565944 819 ntBASIC5□□□□□ -1.61
MTHFRP42898 MTND4LP25-201ENST00000570218 163 ntBASIC5□□□□□ -1.61
MTHFRP42898 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5□□□□□ -1.61
MTHFRP42898 RN7SL652P-201ENST00000577769 300 ntBASIC5□□□□□ -1.61
MTHFRP42898 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5□□□□□ -1.61
MTHFRP42898 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5□□□□□ -1.61
MTHFRP42898 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5□□□□□ -1.61
MTHFRP42898 ZNF92P2-201ENST00000600543 1059 ntBASIC5□□□□□ -1.61
MTHFRP42898 AC073137.1-201ENST00000605636 634 ntBASIC5□□□□□ -1.61
MTHFRP42898 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5□□□□□ -1.61
MTHFRP42898 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5□□□□□ -1.61
MTHFRP42898 MIR1264-201ENST00000616374 69 ntBASIC5□□□□□ -1.61
MTHFRP42898 AL121890.3-201ENST00000618494 516 ntBASIC5□□□□□ -1.61
MTHFRP42898 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5□□□□□ -1.61
MTHFRP42898 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MTHFRP42898 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MTHFRP42898 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5□□□□□ -1.61
MTHFRP42898 MAPK10-349ENST00000641767 3661 ntBASIC5□□□□□ -1.61
MTHFRP42898 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.99□□□□□ -1.61
MTHFRP42898 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
MTHFRP42898 CCT8P1-201ENST00000413611 1657 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.99□□□□□ -1.61
MTHFRP42898 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.99□□□□□ -1.61
MTHFRP42898 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.99□□□□□ -1.61
MTHFRP42898 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.99□□□□□ -1.61
MTHFRP42898 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.99□□□□□ -1.61
MTHFRP42898 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
MTHFRP42898 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 RNU6-244P-201ENST00000391028 104 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 OR6C69P-201ENST00000394268 893 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MTHFRP42898 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.99□□□□□ -1.61
MTHFRP42898 PTP4A1P3-201ENST00000433661 420 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.99□□□□□ -1.61
MTHFRP42898 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.99□□□□□ -1.61
MTHFRP42898 RPS27AP16-201ENST00000492222 470 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 AC091868.1-201ENST00000508746 304 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.99□□□□□ -1.61
MTHFRP42898 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.99□□□□□ -1.61
MTHFRP42898 RNA5SP360-201ENST00000516555 118 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 RNU6-1004P-201ENST00000516584 111 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.99□□□□□ -1.61
MTHFRP42898 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.99□□□□□ -1.61
MTHFRP42898 AC018552.3-201ENST00000567416 561 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 SNORA74C-1-201ENST00000580726 201 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.99□□□□□ -1.61
MTHFRP42898 BNIP3P33-201ENST00000598912 569 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 AC008782.1-201ENST00000603386 430 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 AC010200.2-201ENST00000605098 235 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 AL391834.1-201ENST00000609609 560 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.99□□□□□ -1.61
MTHFRP42898 LINC00901.1-201ENST00000617252 152 ntBASIC4.99□□□□□ -1.61
MTHFRP42898 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.99□□□□□ -1.61
MTHFRP42898 AP005019.3-201ENST00000620418 560 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms