Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHMT2P34897 DHFRP3-201ENST00000455595 559 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 RPL7P32-201ENST00000457119 744 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 AC092905.1-201ENST00000467527 949 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.29□□□□□ -1.72
SHMT2P34897 HMGB3P14-201ENST00000494195 599 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 CEACAMP10-202ENST00000495431 496 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.29□□□□□ -1.72
SHMT2P34897 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 HIGD1AP5-201ENST00000529959 259 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.29□□□□□ -1.72
SHMT2P34897 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.29□□□□□ -1.72
SHMT2P34897 AC009268.1-201ENST00000561352 1203 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.29□□□□□ -1.72
SHMT2P34897 AL139395.1-201ENST00000603662 160 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 AC079587.1-201ENST00000603846 277 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 AL023583.1-201ENST00000607518 1143 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 AP002360.3-201ENST00000607673 710 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 AC004241.3-201ENST00000611728 517 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 AL121873.1-201ENST00000616013 524 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 MIR6891-201ENST00000618788 93 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.29□□□□□ -1.72
SHMT2P34897 BMS1P21-201ENST00000634565 365 ntBASIC4.29□□□□□ -1.72
SHMT2P34897 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.29□□□□□ -1.72
SHMT2P34897 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHMT2P34897 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHMT2P34897 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHMT2P34897 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHMT2P34897 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHMT2P34897 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.29□□□□□ -1.72
SHMT2P34897 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.28□□□□□ -1.72
SHMT2P34897 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SHMT2P34897 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.28□□□□□ -1.72
SHMT2P34897 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHMT2P34897 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHMT2P34897 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.28□□□□□ -1.72
SHMT2P34897 OR4K17-201ENST00000315543 1032 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 RNU4-39P-201ENST00000362455 127 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 RHOT1P2-201ENST00000366423 333 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 MIR141-201ENST00000384975 95 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 SNORA74C-2-201ENST00000411179 201 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 RPS20P14-201ENST00000412545 360 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHMT2P34897 RPS12P5-201ENST00000423449 371 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 AL732292.1-201ENST00000426692 226 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.28□□□□□ -1.72
SHMT2P34897 AC023141.6-201ENST00000429418 337 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 FTH1P16-201ENST00000435241 552 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.28□□□□□ -1.72
SHMT2P34897 EIF2S2P2-201ENST00000447161 982 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.28□□□□□ -1.72
SHMT2P34897 AC009220.1-201ENST00000451614 275 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.28□□□□□ -1.72
SHMT2P34897 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.28□□□□□ -1.72
SHMT2P34897 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.28□□□□□ -1.72
SHMT2P34897 RN7SL98P-201ENST00000462271 300 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.28□□□□□ -1.72
SHMT2P34897 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.28□□□□□ -1.72
SHMT2P34897 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHMT2P34897 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.28□□□□□ -1.72
SHMT2P34897 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.28□□□□□ -1.72
SHMT2P34897 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.28□□□□□ -1.72
SHMT2P34897 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.28□□□□□ -1.72
SHMT2P34897 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHMT2P34897 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHMT2P34897 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.28□□□□□ -1.72
SHMT2P34897 AC068831.4-201ENST00000556118 109 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHMT2P34897 MTND2P13-201ENST00000577438 1039 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.28□□□□□ -1.72
SHMT2P34897 AC008759.1-201ENST00000589783 983 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.28□□□□□ -1.72
SHMT2P34897 uc_338.13-201ENST00000618243 179 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 RMST_5.1-201ENST00000618704 126 ntBASIC4.28□□□□□ -1.72
SHMT2P34897 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.28□□□□□ -1.72
SHMT2P34897 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHMT2P34897 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.28□□□□□ -1.72
SHMT2P34897 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.28□□□□□ -1.72
SHMT2P34897 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHMT2P34897 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHMT2P34897 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHMT2P34897 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHMT2P34897 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHMT2P34897 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
SHMT2P34897 AC105074.1-201ENST00000623380 3095 ntBASIC4.27□□□□□ -1.73
SHMT2P34897 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHMT2P34897 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHMT2P34897 AC090017.1-201ENST00000548612 1779 ntBASIC4.27□□□□□ -1.73
SHMT2P34897 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHMT2P34897 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHMT2P34897 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SHMT2P34897 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHMT2P34897 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHMT2P34897 RNA5SP307-201ENST00000362863 116 ntBASIC4.27□□□□□ -1.73
SHMT2P34897 RNU6-819P-201ENST00000364116 107 ntBASIC4.27□□□□□ -1.73
SHMT2P34897 RNA5SP509-201ENST00000364577 119 ntBASIC4.27□□□□□ -1.73
SHMT2P34897 RNU1-44P-201ENST00000384453 163 ntBASIC4.27□□□□□ -1.73
SHMT2P34897 U3.22-201ENST00000391120 215 ntBASIC4.27□□□□□ -1.73
SHMT2P34897 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.27□□□□□ -1.73
SHMT2P34897 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms