Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 HMGB3P5-201ENST00000428894 612 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGA1P17096 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGA1P17096 Z95327.1-201ENST00000446082 482 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.23□□□□□ -1.73
HMGA1P17096 AL133372.1-201ENST00000493565 745 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 RPL29P14-201ENST00000495837 428 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGA1P17096 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGA1P17096 SNORA67.7-201ENST00000516664 135 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AC023632.4-201ENST00000517783 191 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 HMGB1P23-201ENST00000518743 568 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 IGLV3-26-201ENST00000520756 302 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGA1P17096 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.23□□□□□ -1.73
HMGA1P17096 HSPE1P5-201ENST00000561489 272 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGA1P17096 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGA1P17096 AC233702.9-201ENST00000581528 203 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AC012417.1-201ENST00000582307 1039 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGA1P17096 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGA1P17096 AC245389.1-201ENST00000605141 529 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AL392048.1-201ENST00000613946 534 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AC023509.5-201ENST00000617434 807 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGA1P17096 MIR7702-201ENST00000621931 59 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AL356863.1-201ENST00000623378 1080 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 AC008785.1-201ENST00000624475 456 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 Z95327.2-201ENST00000414579 1873 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HMGA1P17096 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.23□□□□□ -1.73
HMGA1P17096 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGA1P17096 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGA1P17096 AC092435.4-201ENST00000623012 4159 ntBASIC4.22□□□□□ -1.73
HMGA1P17096 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGA1P17096 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGA1P17096 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGA1P17096 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGA1P17096 AC117434.1-201ENST00000419971 836 ntBASIC4.22□□□□□ -1.73
HMGA1P17096 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGA1P17096 NPM1P29-201ENST00000483112 803 ntBASIC4.22□□□□□ -1.73
HMGA1P17096 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGA1P17096 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGA1P17096 YPEL5P3-201ENST00000547227 352 ntBASIC4.22□□□□□ -1.73
HMGA1P17096 AC124068.1-201ENST00000563131 678 ntBASIC4.22□□□□□ -1.73
HMGA1P17096 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGA1P17096 AL592436.1-201ENST00000605135 558 ntBASIC4.22□□□□□ -1.73
HMGA1P17096 AC026979.4-201ENST00000606555 645 ntBASIC4.22□□□□□ -1.73
HMGA1P17096 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGA1P17096 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGA1P17096 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGA1P17096 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGA1P17096 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGA1P17096 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGA1P17096 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.21□□□□□ -1.73
HMGA1P17096 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HMGA1P17096 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGA1P17096 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HMGA1P17096 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 IL6STP1-201ENST00000346911 1020 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HMGA1P17096 HMGB3P19-201ENST00000403971 560 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGA1P17096 PGBD4P8-201ENST00000412993 562 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGA1P17096 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGA1P17096 AC005008.1-201ENST00000456151 612 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 RNU1-45P-201ENST00000517191 141 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGA1P17096 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGA1P17096 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGA1P17096 AC091516.1-201ENST00000549191 703 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGA1P17096 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGA1P17096 AC074050.1-201ENST00000563247 211 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGA1P17096 AC007599.1-201ENST00000568688 1174 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 MIR5685-201ENST00000579080 79 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 MIR3158-1-201ENST00000583596 81 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 AL354798.1-201ENST00000622505 329 ntBASIC4.21□□□□□ -1.74
HMGA1P17096 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGA1P17096 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HMGA1P17096 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
HMGA1P17096 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGA1P17096 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGA1P17096 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms