Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
COL11A1P12107 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
COL11A1P12107 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
COL11A1P12107 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.63□□□□□ -1.67
COL11A1P12107 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 PTMAP2-201ENST00000397627 327 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 AC008280.1-201ENST00000418851 412 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 YME1L1P1-201ENST00000429435 297 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 AL050321.1-201ENST00000432363 400 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 AL049634.3-201ENST00000604968 457 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 AC090912.3-201ENST00000609775 533 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 AC064801.1-201ENST00000612025 407 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.62□□□□□ -1.67
COL11A1P12107 MIR6075-201ENST00000620782 95 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 AC140113.4-201ENST00000622087 222 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
COL11A1P12107 AC021242.1-201ENST00000507315 2035 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.62□□□□□ -1.67
COL11A1P12107 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.62□□□□□ -1.67
COL11A1P12107 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.62□□□□□ -1.67
COL11A1P12107 AL672167.2-201ENST00000377164 879 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 KRR1P1-201ENST00000419430 803 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.62□□□□□ -1.67
COL11A1P12107 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 CYCSP43-201ENST00000438233 310 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 RPS17P13-201ENST00000448974 407 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 AC012158.1-204ENST00000483430 465 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL11A1P12107 AC026726.1-201ENST00000512859 601 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.62□□□□□ -1.67
COL11A1P12107 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.62□□□□□ -1.67
COL11A1P12107 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.62□□□□□ -1.67
COL11A1P12107 AC012417.1-201ENST00000582307 1039 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.62□□□□□ -1.67
COL11A1P12107 QTRT1P1-201ENST00000604344 1078 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 AC019278.1-201ENST00000623516 479 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
COL11A1P12107 HSPD1P11-201ENST00000508643 1702 ntBASIC4.62□□□□□ -1.67
COL11A1P12107 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL11A1P12107 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
COL11A1P12107 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL11A1P12107 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL11A1P12107 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL11A1P12107 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL11A1P12107 ZNF285B-201ENST00000561698 1767 ntBASIC4.61□□□□□ -1.67
COL11A1P12107 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.61□□□□□ -1.67
COL11A1P12107 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL11A1P12107 ATP5F1P3-201ENST00000397213 657 ntBASIC4.61□□□□□ -1.67
COL11A1P12107 HMGN2P31-201ENST00000432430 273 ntBASIC4.61□□□□□ -1.67
COL11A1P12107 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.61□□□□□ -1.67
COL11A1P12107 RPL12P18-201ENST00000437175 325 ntBASIC4.61□□□□□ -1.67
COL11A1P12107 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.61□□□□□ -1.67
COL11A1P12107 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.61□□□□□ -1.67
COL11A1P12107 IGKV2D-19-201ENST00000523346 262 ntBASIC4.61□□□□□ -1.67
COL11A1P12107 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.61□□□□□ -1.67
COL11A1P12107 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.61□□□□□ -1.67
COL11A1P12107 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.61□□□□□ -1.67
COL11A1P12107 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.61□□□□□ -1.67
COL11A1P12107 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL11A1P12107 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL11A1P12107 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL11A1P12107 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL11A1P12107 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL11A1P12107 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL11A1P12107 AL590704.1-201ENST00000402856 794 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.6□□□□□ -1.67
COL11A1P12107 AC108022.1-201ENST00000493466 478 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 DSTNP2-201ENST00000504533 515 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.6□□□□□ -1.67
COL11A1P12107 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.6□□□□□ -1.67
COL11A1P12107 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.6□□□□□ -1.67
COL11A1P12107 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
COL11A1P12107 AC107993.1-201ENST00000591343 684 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 AC005255.1-201ENST00000593748 216 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 OR51C1P-201ENST00000608504 942 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 AL354798.1-201ENST00000622505 329 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.6□□□□□ -1.67
COL11A1P12107 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.6□□□□□ -1.67
COL11A1P12107 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.6□□□□□ -1.67
COL11A1P12107 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
COL11A1P12107 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
COL11A1P12107 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.6□□□□□ -1.67
COL11A1P12107 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.6□□□□□ -1.67
COL11A1P12107 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.6□□□□□ -1.67
COL11A1P12107 AL138820.1-201ENST00000617901 5305 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 AL627171.1-201ENST00000618845 1308 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms