Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.85□□□□□ -1.63
PCNAP12004 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
PCNAP12004 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
PCNAP12004 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCNAP12004 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCNAP12004 AC126323.6-202ENST00000568092 3511 ntBASIC4.85□□□□□ -1.63
PCNAP12004 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PCNAP12004 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PCNAP12004 IGKV7-3-201ENST00000357453 298 ntBASIC4.85□□□□□ -1.63
PCNAP12004 RNU6-984P-201ENST00000363236 109 ntBASIC4.85□□□□□ -1.63
PCNAP12004 RNU6-171P-201ENST00000384354 107 ntBASIC4.85□□□□□ -1.63
PCNAP12004 SNORA66-201ENST00000384792 133 ntBASIC4.85□□□□□ -1.63
PCNAP12004 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.85□□□□□ -1.63
PCNAP12004 DNAJC19P6-201ENST00000401853 280 ntBASIC4.85□□□□□ -1.63
PCNAP12004 RN7SKP125-201ENST00000410481 302 ntBASIC4.85□□□□□ -1.63
PCNAP12004 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 AL592310.1-201ENST00000414330 671 ntBASIC4.85□□□□□ -1.63
PCNAP12004 BTF3P8-201ENST00000414577 526 ntBASIC4.85□□□□□ -1.63
PCNAP12004 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCNAP12004 AL355433.1-201ENST00000422804 300 ntBASIC4.85□□□□□ -1.63
PCNAP12004 MTATP6P17-201ENST00000431030 672 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCNAP12004 RPL35AP21-201ENST00000437667 333 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC005002.1-201ENST00000447458 540 ntBASIC4.85□□□□□ -1.63
PCNAP12004 BTF3P6-201ENST00000448054 499 ntBASIC4.85□□□□□ -1.63
PCNAP12004 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 AL389915.2-201ENST00000454576 441 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC244505.3-201ENST00000454598 187 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC079841.1-201ENST00000481228 950 ntBASIC4.85□□□□□ -1.63
PCNAP12004 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 RN7SKP265-201ENST00000516448 223 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC026407.1-201ENST00000518369 204 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 NDUFS5P6-201ENST00000529136 295 ntBASIC4.85□□□□□ -1.63
PCNAP12004 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.85□□□□□ -1.63
PCNAP12004 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.85□□□□□ -1.63
PCNAP12004 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCNAP12004 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.85□□□□□ -1.63
PCNAP12004 AC023824.3-201ENST00000569003 562 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 MIR3176-201ENST00000582210 90 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
PCNAP12004 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.85□□□□□ -1.63
PCNAP12004 AC087683.2-201ENST00000611384 326 ntBASIC4.85□□□□□ -1.63
PCNAP12004 PART1_2.1-201ENST00000612397 250 ntBASIC4.85□□□□□ -1.63
PCNAP12004 MIR6826-201ENST00000617808 98 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC015914.2-201ENST00000618167 288 ntBASIC4.85□□□□□ -1.63
PCNAP12004 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 AC006963.1-201ENST00000624003 1052 ntBASIC4.85□□□□□ -1.63
PCNAP12004 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCNAP12004 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCNAP12004 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
PCNAP12004 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.85□□□□□ -1.63
PCNAP12004 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.84□□□□□ -1.63
PCNAP12004 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PCNAP12004 LINC01355-201ENST00000566551 5444 ntBASIC4.84□□□□□ -1.63
PCNAP12004 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
PCNAP12004 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.84□□□□□ -1.63
PCNAP12004 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PCNAP12004 RPL23P2-201ENST00000320371 421 ntBASIC4.84□□□□□ -1.63
PCNAP12004 SNORA51.1-201ENST00000363243 140 ntBASIC4.84□□□□□ -1.63
PCNAP12004 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PCNAP12004 MIR1303-201ENST00000408625 86 ntBASIC4.84□□□□□ -1.63
PCNAP12004 SNORA77-201ENST00000408716 125 ntBASIC4.84□□□□□ -1.63
PCNAP12004 RN7SKP199-201ENST00000410325 305 ntBASIC4.84□□□□□ -1.63
PCNAP12004 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.84□□□□□ -1.63
PCNAP12004 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.84□□□□□ -1.63
PCNAP12004 SSR1P2-201ENST00000415208 787 ntBASIC4.84□□□□□ -1.63
PCNAP12004 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 AC092648.1-201ENST00000425870 423 ntBASIC4.84□□□□□ -1.63
PCNAP12004 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.84□□□□□ -1.63
PCNAP12004 HMGB3P5-201ENST00000428894 612 ntBASIC4.84□□□□□ -1.63
PCNAP12004 GTF2IP3-201ENST00000433887 494 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.84□□□□□ -1.63
PCNAP12004 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.84□□□□□ -1.63
PCNAP12004 TPTE2P3-201ENST00000441562 1189 ntBASIC4.84□□□□□ -1.63
PCNAP12004 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.84□□□□□ -1.63
PCNAP12004 RPL7AP61-201ENST00000443410 636 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms