Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFP01375 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFP01375 AC027176.2-201ENST00000559166 746 ntBASIC4.08□□□□□ -1.76
TNFP01375 RNU6-84P-201ENST00000607737 102 ntBASIC4.08□□□□□ -1.76
TNFP01375 AP001273.1-201ENST00000624493 3152 ntBASIC4.08□□□□□ -1.76
TNFP01375 AL596275.2-204ENST00000641628 552 ntBASIC4.08□□□□□ -1.76
TNFP01375 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TNFP01375 AL596275.2-206ENST00000641957 626 ntBASIC4.08□□□□□ -1.76
TNFP01375 NEAT1-202ENST00000501122 22743 ntBASIC4.08□□□□□ -1.76
TNFP01375 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TNFP01375 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFP01375 AC087190.4-201ENST00000574616 8334 ntBASIC4.08□□□□□ -1.76
TNFP01375 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFP01375 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
TNFP01375 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 AC116667.1-201ENST00000604855 2072 ntBASIC4.07□□□□□ -1.76
TNFP01375 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TNFP01375 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 RNU1-15P-201ENST00000353977 144 ntBASIC4.07□□□□□ -1.76
TNFP01375 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 RN7SKP280-201ENST00000364196 304 ntBASIC4.07□□□□□ -1.76
TNFP01375 AC025750.1-201ENST00000399891 379 ntBASIC4.07□□□□□ -1.76
TNFP01375 RN7SKP167-201ENST00000411047 285 ntBASIC4.07□□□□□ -1.76
TNFP01375 RN7SKP247-201ENST00000411094 308 ntBASIC4.07□□□□□ -1.76
TNFP01375 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFP01375 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.07□□□□□ -1.76
TNFP01375 RPL7P2-201ENST00000427639 268 ntBASIC4.07□□□□□ -1.76
TNFP01375 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 AC002553.2-201ENST00000453217 340 ntBASIC4.07□□□□□ -1.76
TNFP01375 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFP01375 AC108145.1-201ENST00000503770 153 ntBASIC4.07□□□□□ -1.76
TNFP01375 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFP01375 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFP01375 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.07□□□□□ -1.76
TNFP01375 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 AC063950.1-201ENST00000552036 308 ntBASIC4.07□□□□□ -1.76
TNFP01375 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFP01375 MIR6875-201ENST00000617506 72 ntBASIC4.07□□□□□ -1.76
TNFP01375 AC074140.1-201ENST00000621617 208 ntBASIC4.07□□□□□ -1.76
TNFP01375 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TNFP01375 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFP01375 AC022893.2-201ENST00000564832 3296 ntBASIC4.07□□□□□ -1.76
TNFP01375 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFP01375 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFP01375 CDC27P2-201ENST00000425026 1922 ntBASIC4.07□□□□□ -1.76
TNFP01375 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
TNFP01375 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFP01375 AC092162.3-201ENST00000624511 1624 ntBASIC4.06□□□□□ -1.76
TNFP01375 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TNFP01375 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.06□□□□□ -1.76
TNFP01375 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 SNORA60-201ENST00000362396 134 ntBASIC4.06□□□□□ -1.76
TNFP01375 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TNFP01375 RN7SKP199-201ENST00000410325 305 ntBASIC4.06□□□□□ -1.76
TNFP01375 CASKP1-201ENST00000412870 582 ntBASIC4.06□□□□□ -1.76
TNFP01375 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFP01375 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFP01375 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 AC115285.1-201ENST00000424879 736 ntBASIC4.06□□□□□ -1.76
TNFP01375 OR8F1P-201ENST00000425243 930 ntBASIC4.06□□□□□ -1.76
TNFP01375 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFP01375 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 AC122718.1-201ENST00000439448 744 ntBASIC4.06□□□□□ -1.76
TNFP01375 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 AC006011.1-201ENST00000442758 349 ntBASIC4.06□□□□□ -1.76
TNFP01375 AL591363.1-201ENST00000450091 483 ntBASIC4.06□□□□□ -1.76
TNFP01375 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFP01375 FAM133DP-201ENST00000464802 691 ntBASIC4.06□□□□□ -1.76
TNFP01375 RN7SL817P-201ENST00000480777 288 ntBASIC4.06□□□□□ -1.76
TNFP01375 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TNFP01375 TPT1P3-201ENST00000492841 512 ntBASIC4.06□□□□□ -1.76
TNFP01375 AC010460.1-201ENST00000507087 466 ntBASIC4.06□□□□□ -1.76
TNFP01375 MTND4LP31-201ENST00000514859 294 ntBASIC4.06□□□□□ -1.76
TNFP01375 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFP01375 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFP01375 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFP01375 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFP01375 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TNFP01375 AL161637.1-201ENST00000622380 412 ntBASIC4.06□□□□□ -1.76
TNFP01375 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TNFP01375 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFP01375 CASC19-261ENST00000641853 1638 ntBASIC4.06□□□□□ -1.76
TNFP01375 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFP01375 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFP01375 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFP01375 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TNFP01375 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TNFP01375 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFP01375 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms