Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
NKX2-2O95096 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-2O95096 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-2O95096 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-2O95096 MIR16-1-201ENST00000385271 89 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NKX2-2O95096 MTCO2P31-201ENST00000402702 684 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 GJA6P-201ENST00000415117 1042 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 BMS1P13-201ENST00000417301 885 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-2O95096 GTF2IP2-201ENST00000424290 697 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AC092648.1-201ENST00000425870 423 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AL035246.1-201ENST00000433554 1255 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 EIF2S2P2-201ENST00000447161 982 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-2O95096 OFD1P3Y-201ENST00000453312 783 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 GYG1P1-201ENST00000460864 698 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 NAP1L1P3-201ENST00000462291 880 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AC104689.1-201ENST00000473356 768 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 RN7SL97P-201ENST00000486780 299 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AC093720.1-201ENST00000505681 714 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AC118282.2-201ENST00000508739 374 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AC008885.2-201ENST00000509506 930 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 ENPP7P9-201ENST00000514456 627 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 SNORA70.11-201ENST00000515987 138 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 SNORA70.13-201ENST00000516116 138 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 IGLV2-28-201ENST00000520681 304 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-2O95096 OR10G5P-201ENST00000532733 358 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AC005868.1-201ENST00000536421 331 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-2O95096 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-2O95096 PCNAP1-202ENST00000595299 752 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 BNIP3P38-201ENST00000601117 544 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 SGO1P1-201ENST00000603525 1447 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 MEMO1P5-201ENST00000604810 406 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-2O95096 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-2O95096 AL138478.1-201ENST00000612252 832 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.59□□□□□ -1.67
NKX2-2O95096 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.59□□□□□ -1.67
NKX2-2O95096 OR1S1-201ENST00000624470 978 ntBASIC4.59□□□□□ -1.67
NKX2-2O95096 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-2O95096 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NKX2-2O95096 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NKX2-2O95096 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NKX2-2O95096 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.59□□□□□ -1.68
NKX2-2O95096 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NKX2-2O95096 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.59□□□□□ -1.68
NKX2-2O95096 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.59□□□□□ -1.68
NKX2-2O95096 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.59□□□□□ -1.68
NKX2-2O95096 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 AL451142.2-201ENST00000429076 2090 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 HSPA8P18-201ENST00000439846 1928 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX2-2O95096 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 AC005005.4-201ENST00000623789 16698 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NKX2-2O95096 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NKX2-2O95096 RNA5SP305-201ENST00000362665 119 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 OR1L1-202ENST00000373686 1083 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
NKX2-2O95096 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 MIR1178-201ENST00000408396 91 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AF186996.5-201ENST00000418098 904 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-2O95096 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX2-2O95096 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-2O95096 AL137845.2-201ENST00000444292 988 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 HMGB3P6-201ENST00000444896 598 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AC073850.1-201ENST00000449243 255 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 ZNF886P-201ENST00000450781 723 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-2O95096 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 RPS27P23-201ENST00000487608 251 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-2O95096 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-2O95096 RN7SKP147-201ENST00000517154 244 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.58□□□□□ -1.68
NKX2-2O95096 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms