Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL592291.1-201ENST00000403830 352 ntBASIC4.81□□□□□ -1.64
GPC4O75487 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC4O75487 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC4O75487 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.81□□□□□ -1.64
GPC4O75487 MTND4P11-201ENST00000417020 1058 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC004690.1-201ENST00000418216 328 ntBASIC4.81□□□□□ -1.64
GPC4O75487 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.81□□□□□ -1.64
GPC4O75487 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 AC093422.3-201ENST00000428506 305 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC4O75487 FABP7P2-201ENST00000429946 379 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC4O75487 AC093414.1-201ENST00000434712 514 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC000041.1-201ENST00000439655 175 ntBASIC4.81□□□□□ -1.64
GPC4O75487 RPS26P2-201ENST00000440331 348 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC4O75487 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.81□□□□□ -1.64
GPC4O75487 RHEBP2-201ENST00000450289 600 ntBASIC4.81□□□□□ -1.64
GPC4O75487 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC4O75487 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 RPL23AP56-201ENST00000460778 453 ntBASIC4.81□□□□□ -1.64
GPC4O75487 TPT1P3-201ENST00000492841 512 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC010627.1-201ENST00000503819 1294 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC4O75487 SUMO2P5-201ENST00000506790 245 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.81□□□□□ -1.64
GPC4O75487 Y_RNA.719-201ENST00000517156 106 ntBASIC4.81□□□□□ -1.64
GPC4O75487 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.81□□□□□ -1.64
GPC4O75487 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.81□□□□□ -1.64
GPC4O75487 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC4O75487 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC4O75487 AC087894.1-201ENST00000538359 518 ntBASIC4.81□□□□□ -1.64
GPC4O75487 GCSHP4-201ENST00000538792 439 ntBASIC4.81□□□□□ -1.64
GPC4O75487 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC4O75487 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.81□□□□□ -1.64
GPC4O75487 AC051619.2-201ENST00000559063 397 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC044860.2-201ENST00000561005 179 ntBASIC4.81□□□□□ -1.64
GPC4O75487 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.81□□□□□ -1.64
GPC4O75487 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.81□□□□□ -1.64
GPC4O75487 AP000919.1-202ENST00000581139 1264 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC4O75487 AC011453.2-201ENST00000603737 729 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC133644.2-201ENST00000608142 540 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC4O75487 AL669942.2-201ENST00000620352 697 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC019206.1-201ENST00000621938 425 ntBASIC4.81□□□□□ -1.64
GPC4O75487 CR381572.2-201ENST00000624852 397 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AC006927.2-201ENST00000639256 389 ntBASIC4.81□□□□□ -1.64
GPC4O75487 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC4O75487 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 AC104118.1-201ENST00000607625 1589 ntBASIC4.81□□□□□ -1.64
GPC4O75487 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
GPC4O75487 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 AC093775.1-201ENST00000624154 1868 ntBASIC4.81□□□□□ -1.64
GPC4O75487 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 AC008758.3-201ENST00000507003 1829 ntBASIC4.81□□□□□ -1.64
GPC4O75487 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GPC4O75487 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC4O75487 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GPC4O75487 AC099654.2-201ENST00000433031 1980 ntBASIC4.8□□□□□ -1.64
GPC4O75487 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC4O75487 HSPD1P14-201ENST00000432666 1618 ntBASIC4.8□□□□□ -1.64
GPC4O75487 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC4O75487 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GPC4O75487 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
GPC4O75487 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GPC4O75487 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC4O75487 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GPC4O75487 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC4O75487 RNU6-317P-201ENST00000384031 107 ntBASIC4.8□□□□□ -1.64
GPC4O75487 AL589647.1-201ENST00000402485 466 ntBASIC4.8□□□□□ -1.64
GPC4O75487 AC096533.1-201ENST00000411645 353 ntBASIC4.8□□□□□ -1.64
GPC4O75487 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.8□□□□□ -1.64
GPC4O75487 TBCAP2-201ENST00000416175 326 ntBASIC4.8□□□□□ -1.64
GPC4O75487 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.8□□□□□ -1.64
GPC4O75487 TCEA1P2-201ENST00000420496 906 ntBASIC4.8□□□□□ -1.64
GPC4O75487 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC4O75487 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.8□□□□□ -1.64
GPC4O75487 LYPLA1P1-201ENST00000434514 622 ntBASIC4.8□□□□□ -1.64
GPC4O75487 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.8□□□□□ -1.64
GPC4O75487 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC4O75487 RPL10P17-201ENST00000453852 316 ntBASIC4.8□□□□□ -1.64
GPC4O75487 AL035407.2-201ENST00000454090 378 ntBASIC4.8□□□□□ -1.64
GPC4O75487 GTF2IP12-201ENST00000456547 356 ntBASIC4.8□□□□□ -1.64
GPC4O75487 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.8□□□□□ -1.64
GPC4O75487 RPL23AP12-201ENST00000467573 473 ntBASIC4.8□□□□□ -1.64
GPC4O75487 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.8□□□□□ -1.64
GPC4O75487 AC104982.1-201ENST00000478775 574 ntBASIC4.8□□□□□ -1.64
GPC4O75487 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
GPC4O75487 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC4O75487 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms