Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC092638.1-201ENST00000411966 1275 ntBASIC4.51□□□□□ -1.69
SSX4O60224 RPL6P29-201ENST00000414863 865 ntBASIC4.51□□□□□ -1.69
SSX4O60224 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX4O60224 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AC099336.2-201ENST00000422457 254 ntBASIC4.51□□□□□ -1.69
SSX4O60224 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.51□□□□□ -1.69
SSX4O60224 PPIAP13-201ENST00000434706 478 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX4O60224 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX4O60224 SEPT14P24-201ENST00000447236 180 ntBASIC4.51□□□□□ -1.69
SSX4O60224 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 BX842559.2-201ENST00000451418 605 ntBASIC4.51□□□□□ -1.69
SSX4O60224 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX4O60224 Z92846.1-201ENST00000456203 268 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 AC099560.2-201ENST00000457554 255 ntBASIC4.51□□□□□ -1.69
SSX4O60224 snoU109.3-201ENST00000459477 145 ntBASIC4.51□□□□□ -1.69
SSX4O60224 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX4O60224 BX284632.1-201ENST00000478218 541 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AL161747.1-201ENST00000480068 358 ntBASIC4.51□□□□□ -1.69
SSX4O60224 RPL7P6-201ENST00000480903 738 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AL035404.1-201ENST00000497982 568 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AC026414.1-201ENST00000504046 698 ntBASIC4.51□□□□□ -1.69
SSX4O60224 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 AC110775.1-201ENST00000513721 462 ntBASIC4.51□□□□□ -1.69
SSX4O60224 RNA5SP249-201ENST00000516127 99 ntBASIC4.51□□□□□ -1.69
SSX4O60224 HMGB1P23-201ENST00000518743 568 ntBASIC4.51□□□□□ -1.69
SSX4O60224 HMGB1P1-201ENST00000522557 636 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX4O60224 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX4O60224 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX4O60224 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX4O60224 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX4O60224 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 MIR3934-201ENST00000579806 107 ntBASIC4.51□□□□□ -1.69
SSX4O60224 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 VN1R87P-201ENST00000596706 487 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX4O60224 AC123786.2-201ENST00000603459 275 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AC026790.2-201ENST00000606282 430 ntBASIC4.51□□□□□ -1.69
SSX4O60224 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX4O60224 AC093673.2-201ENST00000609674 331 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AC006946.3-201ENST00000609791 756 ntBASIC4.51□□□□□ -1.69
SSX4O60224 MIR6820-201ENST00000611508 62 ntBASIC4.51□□□□□ -1.69
SSX4O60224 EIF3FP1-201ENST00000613970 806 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AC090527.3-201ENST00000619041 548 ntBASIC4.51□□□□□ -1.69
SSX4O60224 AC116563.2-201ENST00000624751 535 ntBASIC4.51□□□□□ -1.69
SSX4O60224 OR4G3P-201ENST00000633500 913 ntBASIC4.51□□□□□ -1.69
SSX4O60224 ATE1-AS1-202ENST00000636460 506 ntBASIC4.51□□□□□ -1.69
SSX4O60224 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SSX4O60224 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 AC107027.3-201ENST00000565095 3473 ntBASIC4.51□□□□□ -1.69
SSX4O60224 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX4O60224 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 AC108751.5-201ENST00000492880 1336 ntBASIC4.5□□□□□ -1.69
SSX4O60224 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.5□□□□□ -1.69
SSX4O60224 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX4O60224 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSX4O60224 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
SSX4O60224 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.5□□□□□ -1.69
SSX4O60224 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 RNA5SP223-201ENST00000365174 120 ntBASIC4.5□□□□□ -1.69
SSX4O60224 AC093719.1-202ENST00000392735 373 ntBASIC4.5□□□□□ -1.69
SSX4O60224 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 VN1R51P-201ENST00000411675 945 ntBASIC4.5□□□□□ -1.69
SSX4O60224 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.5□□□□□ -1.69
SSX4O60224 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 FABP7P1-201ENST00000424004 391 ntBASIC4.5□□□□□ -1.69
SSX4O60224 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SSX4O60224 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.5□□□□□ -1.69
SSX4O60224 CYCSP34-201ENST00000458172 304 ntBASIC4.5□□□□□ -1.69
SSX4O60224 AC092905.1-201ENST00000467527 949 ntBASIC4.5□□□□□ -1.69
SSX4O60224 AC083982.1-201ENST00000485679 344 ntBASIC4.5□□□□□ -1.69
SSX4O60224 NIP7P2-201ENST00000485801 544 ntBASIC4.5□□□□□ -1.69
SSX4O60224 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX4O60224 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 GTF2F2P1-201ENST00000511083 675 ntBASIC4.5□□□□□ -1.69
SSX4O60224 AC021146.3-201ENST00000511911 260 ntBASIC4.5□□□□□ -1.69
SSX4O60224 AC004980.4-201ENST00000513375 203 ntBASIC4.5□□□□□ -1.69
SSX4O60224 SNORA19.3-201ENST00000516165 130 ntBASIC4.5□□□□□ -1.69
SSX4O60224 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX4O60224 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SSX4O60224 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms