Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SGCEO43556 RNU6-1279P-201ENST00000383917 103 ntBASIC3.94□□□□□ -1.78
SGCEO43556 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 MIR1183-201ENST00000408856 89 ntBASIC3.94□□□□□ -1.78
SGCEO43556 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.94□□□□□ -1.78
SGCEO43556 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.94□□□□□ -1.78
SGCEO43556 AC093698.1-201ENST00000423843 571 ntBASIC3.94□□□□□ -1.78
SGCEO43556 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.94□□□□□ -1.78
SGCEO43556 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.94□□□□□ -1.78
SGCEO43556 RPL7P33-201ENST00000444159 742 ntBASIC3.94□□□□□ -1.78
SGCEO43556 EEF1A1P1-201ENST00000447052 739 ntBASIC3.94□□□□□ -1.78
SGCEO43556 CEACAMP6-201ENST00000452007 574 ntBASIC3.94□□□□□ -1.78
SGCEO43556 VN1R32P-201ENST00000452234 905 ntBASIC3.94□□□□□ -1.78
SGCEO43556 AC012158.1-204ENST00000483430 465 ntBASIC3.94□□□□□ -1.78
SGCEO43556 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.94□□□□□ -1.78
SGCEO43556 AC108471.1-201ENST00000513977 287 ntBASIC3.94□□□□□ -1.78
SGCEO43556 HNRNPKP5-201ENST00000515300 253 ntBASIC3.94□□□□□ -1.78
SGCEO43556 SNORD116-30-201ENST00000516468 85 ntBASIC3.94□□□□□ -1.78
SGCEO43556 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.94□□□□□ -1.78
SGCEO43556 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.94□□□□□ -1.78
SGCEO43556 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 AP001781.1-201ENST00000530977 207 ntBASIC3.94□□□□□ -1.78
SGCEO43556 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.94□□□□□ -1.78
SGCEO43556 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SGCEO43556 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 AL133243.1-201ENST00000614487 366 ntBASIC3.94□□□□□ -1.78
SGCEO43556 MIR4727-201ENST00000622232 55 ntBASIC3.94□□□□□ -1.78
SGCEO43556 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SGCEO43556 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.94□□□□□ -1.78
SGCEO43556 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.94□□□□□ -1.78
SGCEO43556 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SGCEO43556 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.94□□□□□ -1.78
SGCEO43556 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SGCEO43556 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SGCEO43556 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.93□□□□□ -1.78
SGCEO43556 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SGCEO43556 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SGCEO43556 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.93□□□□□ -1.78
SGCEO43556 AC103591.2-201ENST00000265259 766 ntBASIC3.93□□□□□ -1.78
SGCEO43556 SNORD113.2-201ENST00000364166 89 ntBASIC3.93□□□□□ -1.78
SGCEO43556 RNA5SP151-201ENST00000365632 117 ntBASIC3.93□□□□□ -1.78
SGCEO43556 SNORA70F-201ENST00000384142 135 ntBASIC3.93□□□□□ -1.78
SGCEO43556 RNU1-44P-201ENST00000384453 163 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.93□□□□□ -1.78
SGCEO43556 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.93□□□□□ -1.78
SGCEO43556 TRGV6-201ENST00000417928 299 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.93□□□□□ -1.78
SGCEO43556 ARAFP1-201ENST00000422172 605 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.93□□□□□ -1.78
SGCEO43556 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.93□□□□□ -1.78
SGCEO43556 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.93□□□□□ -1.78
SGCEO43556 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.93□□□□□ -1.78
SGCEO43556 AC092905.1-201ENST00000467527 949 ntBASIC3.93□□□□□ -1.78
SGCEO43556 RN7SL354P-201ENST00000469282 294 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.93□□□□□ -1.78
SGCEO43556 PPBPP1-201ENST00000510807 373 ntBASIC3.93□□□□□ -1.78
SGCEO43556 SNORD116-26-201ENST00000516006 96 ntBASIC3.93□□□□□ -1.78
SGCEO43556 RNU6-347P-201ENST00000516658 105 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.93□□□□□ -1.78
SGCEO43556 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.93□□□□□ -1.78
SGCEO43556 AP006289.1-201ENST00000538089 277 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.93□□□□□ -1.78
SGCEO43556 AC069061.3-201ENST00000582254 823 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AC090181.2-201ENST00000602975 672 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AP002360.3-201ENST00000607673 710 ntBASIC3.93□□□□□ -1.78
SGCEO43556 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.93□□□□□ -1.78
SGCEO43556 AP005212.4-201ENST00000614206 710 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AC009318.3-201ENST00000616916 503 ntBASIC3.93□□□□□ -1.78
SGCEO43556 RMST_5.1-201ENST00000618704 126 ntBASIC3.93□□□□□ -1.78
SGCEO43556 AL359715.5-201ENST00000623431 443 ntBASIC3.93□□□□□ -1.78
SGCEO43556 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.93□□□□□ -1.78
SGCEO43556 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
SGCEO43556 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.93□□□□□ -1.78
SGCEO43556 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SGCEO43556 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.93□□□□□ -1.78
SGCEO43556 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SGCEO43556 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.93□□□□□ -1.78
SGCEO43556 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.92□□□□□ -1.78
SGCEO43556 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SGCEO43556 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
SGCEO43556 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SGCEO43556 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SGCEO43556 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms