Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4□□□□□ -1.77
UPK1AO00322 TRAV8-5-201ENST00000537369 341 ntBASIC4□□□□□ -1.77
UPK1AO00322 PDCD5P1-201ENST00000543528 309 ntBASIC4□□□□□ -1.77
UPK1AO00322 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4□□□□□ -1.77
UPK1AO00322 AC090515.3-201ENST00000560431 315 ntBASIC4□□□□□ -1.77
UPK1AO00322 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4□□□□□ -1.77
UPK1AO00322 AC068020.1-201ENST00000594215 661 ntBASIC4□□□□□ -1.77
UPK1AO00322 HMGB1P50-201ENST00000605814 607 ntBASIC4□□□□□ -1.77
UPK1AO00322 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4□□□□□ -1.77
UPK1AO00322 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4□□□□□ -1.77
UPK1AO00322 AC008013.2-202ENST00000637965 364 ntBASIC4□□□□□ -1.77
UPK1AO00322 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4□□□□□ -1.77
UPK1AO00322 DDX18P3-201ENST00000404856 2007 ntBASIC4□□□□□ -1.77
UPK1AO00322 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4□□□□□ -1.77
UPK1AO00322 VPS35P1-201ENST00000563400 1518 ntBASIC4□□□□□ -1.77
UPK1AO00322 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4□□□□□ -1.77
UPK1AO00322 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.99□□□□□ -1.77
UPK1AO00322 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 OR13C3-201ENST00000374781 1108 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AL607077.1-201ENST00000401718 499 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 SNORA3C-201ENST00000408792 125 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AP000357.1-201ENST00000409926 1165 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 NRBF2P2-201ENST00000413087 861 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 AC245028.1-201ENST00000423259 256 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AL138787.1-202ENST00000437804 898 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 TPTE2P3-201ENST00000441562 1189 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 SERPINA7P1-201ENST00000443077 631 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.99□□□□□ -1.77
UPK1AO00322 RPL23AP81-201ENST00000455252 467 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.99□□□□□ -1.77
UPK1AO00322 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.99□□□□□ -1.77
UPK1AO00322 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 AC022616.2-201ENST00000523185 300 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
UPK1AO00322 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 SULT1C2P2-201ENST00000562517 294 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AC122134.1-201ENST00000565664 1104 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 MIR4675-201ENST00000577898 77 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 SNORD39.2-201ENST00000579995 76 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK1AO00322 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.99□□□□□ -1.77
UPK1AO00322 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.99□□□□□ -1.77
UPK1AO00322 AC068790.4-201ENST00000602474 263 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AL445363.3-201ENST00000623080 671 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AL359715.5-201ENST00000623431 443 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UPK1AO00322 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
UPK1AO00322 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UPK1AO00322 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.99□□□□□ -1.77
UPK1AO00322 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 AL158163.1-201ENST00000603915 1649 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AL606537.1-201ENST00000607258 2011 ntBASIC3.99□□□□□ -1.77
UPK1AO00322 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPK1AO00322 AC093775.1-201ENST00000624154 1868 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 AC018529.3-201ENST00000624212 2254 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 RLIMP2-201ENST00000427891 1563 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UPK1AO00322 FAM3C2-201ENST00000312214 681 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 IGKV7-3-201ENST00000357453 298 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
UPK1AO00322 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 MFSD13B-201ENST00000420133 1290 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.98□□□□□ -1.77
UPK1AO00322 RPL12P34-201ENST00000424532 479 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.98□□□□□ -1.77
UPK1AO00322 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 AC068287.1-201ENST00000430283 295 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 FHP1-201ENST00000442741 703 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.98□□□□□ -1.77
UPK1AO00322 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.98□□□□□ -1.77
UPK1AO00322 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPK1AO00322 AL121877.1-201ENST00000453704 622 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 RPL23AP71-201ENST00000470966 469 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 RN7SL459P-201ENST00000481078 302 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.98□□□□□ -1.77
UPK1AO00322 BNIP3P41-201ENST00000503774 571 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK1AO00322 RNA5SP73-201ENST00000516744 108 ntBASIC3.98□□□□□ -1.77
UPK1AO00322 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms