Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL513533.1-201ENST00000453728 415 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 RPS17P2-201ENST00000461663 408 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 RN7SL517P-201ENST00000462240 305 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 RPL21P47-201ENST00000483696 477 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 RPL23AP53-201ENST00000521854 457 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AP000916.1-201ENST00000533869 835 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC133555.2-201ENST00000550213 292 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AL121594.4-201ENST00000556211 1196 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 SNORA74C-1-201ENST00000580726 201 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC007497.1-201ENST00000610421 561 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 MIR378J-201ENST00000611988 109 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 MIR6853-201ENST00000619642 74 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 MIR7641-1-201ENST00000627518 61 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 AC083843.3-201ENST00000623679 2186 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 MFSD8-213ENST00000641134 1327 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 MTCO1P18-201ENST00000455518 1419 ntBASIC4.38□□□□□ -1.71
NPIPA3F8WFD2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 BX510359.2-201ENST00000417920 305 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 TRGV6-201ENST00000417928 299 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AL590609.2-201ENST00000421430 368 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC068287.1-201ENST00000430283 295 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 MRPL50P1-201ENST00000431951 384 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 GTF3AP5-201ENST00000442645 697 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 RPS6P2-201ENST00000454208 705 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC010326.1-201ENST00000462726 602 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 ENPP7P9-201ENST00000514456 627 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 RNA5SP392-201ENST00000516905 112 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AL049830.4-201ENST00000555149 351 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 MIR3936-201ENST00000584304 110 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC011453.2-201ENST00000603737 729 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC098935.2-201ENST00000604222 466 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC133552.5-201ENST00000604266 540 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AP005229.2-201ENST00000609980 697 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 VN1R9P-201ENST00000614184 867 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 CR381572.2-201ENST00000624852 397 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 AC106858.1-201ENST00000637497 429 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 HSPD1P11-201ENST00000508643 1702 ntBASIC4.37□□□□□ -1.71
NPIPA3F8WFD2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms