Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 DDX18P4-201ENST00000511690 1966 ntBASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA2E9PIF3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC000374.1-201ENST00000434698 1745 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 OR4K15-201ENST00000305051 1216 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 SNORD115-48-201ENST00000364764 76 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 RNU1-82P-201ENST00000390851 165 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC105402.1-201ENST00000413336 545 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 MTCO1P52-201ENST00000433928 531 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC007688.1-201ENST00000475592 759 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC093267.1-201ENST00000489176 961 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 COL6A4P2-205ENST00000509855 506 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 RNU1-6P-201ENST00000516290 144 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 RN7SL802P-201ENST00000577858 299 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 MIR5699-201ENST00000578903 90 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 MIR4697-201ENST00000582977 78 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AL731566.2-201ENST00000618971 317 ntBASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
NPIPA2E9PIF3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 SNORA62-201ENST00000365493 153 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AL049697.2-201ENST00000403708 294 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 UBE2V1P15-201ENST00000407776 448 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC013404.1-201ENST00000413068 249 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 ATG4AP1-201ENST00000416893 538 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 CYCSP10-201ENST00000417973 294 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 TMBIM7P-201ENST00000418074 855 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 LINC00993-201ENST00000420453 540 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 RGS17P1-201ENST00000423358 553 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 GTF2IP2-201ENST00000424290 697 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 CNOT7P1-201ENST00000429006 852 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 HMGB1P5-202ENST00000451497 985 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 FGF7P3-201ENST00000454645 303 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC107398.1-201ENST00000486904 505 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 RNA5SP303-201ENST00000516192 130 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 IGKV2D-10-201ENST00000520194 281 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 SMARCE1P4-201ENST00000523647 241 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AL110118.1-201ENST00000553543 400 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms