Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC084824.1-201ENST00000550917 1005 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AL049779.2-201ENST00000553847 315 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC090616.2-202ENST00000584248 222 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AL390838.2-201ENST00000602394 274 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AL121612.2-201ENST00000612261 482 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RNA5SP439-201ENST00000617595 124 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AC132068.1-201ENST00000623805 459 ntBASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB1Q9Y5F3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
PCDHB1Q9Y5F3 AC104964.3-201ENST00000606115 2860 ntBASIC5.46□□□□□ -1.53
PCDHB1Q9Y5F3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB1Q9Y5F3 Z99496.1-201ENST00000469424 1477 ntBASIC5.46□□□□□ -1.53
PCDHB1Q9Y5F3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB1Q9Y5F3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 FAM3C2-201ENST00000312214 681 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RNU6-304P-201ENST00000364855 107 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 SNORA70.6-201ENST00000383934 134 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC136624.1-201ENST00000400791 413 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RNU6-757P-201ENST00000410334 100 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 SETP15-201ENST00000412724 337 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RPSAP35-201ENST00000413753 818 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC004074.1-201ENST00000421810 1063 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 MGAT2P2-201ENST00000427194 797 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RPS27AP6-201ENST00000427962 448 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 MTCO3P5-201ENST00000433620 714 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AP000936.3-201ENST00000438127 255 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 MED28P3-201ENST00000444288 531 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 YWHAQP9-201ENST00000445891 512 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RFC5P1-201ENST00000454419 874 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RPL7AP52-201ENST00000458096 790 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 BZW1P2-201ENST00000473537 826 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RPL7AP6-201ENST00000477943 801 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC104090.1-201ENST00000506341 1171 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 RNU6-232P-201ENST00000517144 64 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 IGKV2-36-201ENST00000519999 223 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC087808.1-201ENST00000520501 361 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC018442.3-201ENST00000523025 183 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 MIR4999-201ENST00000585029 91 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC012616.1-201ENST00000600294 197 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 NTAN1P1-201ENST00000603150 646 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC009237.13-201ENST00000603193 276 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC096553.1-201ENST00000605169 829 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC122133.1-201ENST00000613964 233 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC010608.2-201ENST00000624830 470 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 GVINP1-202ENST00000531871 7271 ntBASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB1Q9Y5F3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms