Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 MRPL35P2-201ENST00000448009 511 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC073387.1-201ENST00000453261 709 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 snoU13.29-201ENST00000459370 104 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC037198.2-201ENST00000478845 733 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 RNA5SP303-201ENST00000516192 130 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AP001922.4-201ENST00000526967 290 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 OR11H3P-201ENST00000554547 982 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC090888.1-201ENST00000561335 1141 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 OR1F2P-201ENST00000570470 933 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC012254.4-201ENST00000588843 273 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AL049539.1-201ENST00000611964 459 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AL138478.1-201ENST00000612252 832 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC024257.5-201ENST00000612739 531 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AP001784.1-201ENST00000624107 428 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC135068.5-201ENST00000624197 983 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AP003400.3-201ENST00000624904 346 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 ZNF849P-201ENST00000594711 1566 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 MAPK10-263ENST00000641052 4307 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AL445437.1-201ENST00000623157 3087 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 MTND4P10-201ENST00000446199 1363 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 MIR585-201ENST00000384887 94 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 PPIAP9-201ENST00000403866 498 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 NPM1P18-201ENST00000434232 732 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 NANOGP2-201ENST00000435391 727 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 SEPT14P24-201ENST00000447236 180 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 MRPL35P4-201ENST00000453682 566 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 RPL7P32-201ENST00000457119 744 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC111000.2-201ENST00000507775 550 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC091912.1-201ENST00000511351 248 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 RNU5A-4P-201ENST00000516588 111 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 MTCYBP20-201ENST00000524239 1129 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC006518.2-201ENST00000542513 940 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 MIR4700-201ENST00000578311 74 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC103987.3-201ENST00000582071 292 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AL020997.3-201ENST00000602843 359 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AP002906.1-201ENST00000603405 233 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC105129.3-201ENST00000605455 485 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC025175.1-201ENST00000606482 759 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC244107.2-201ENST00000611773 76 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC067852.7-201ENST00000623270 535 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC021106.3-201ENST00000623925 531 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC092184.1-201ENST00000625042 715 ntBASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
CTDP1Q9Y5B0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.06□□□□□ -1.44
CTDP1Q9Y5B0 BTBD10P1-201ENST00000549824 1352 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms