Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 DDX18P6-201ENST00000450119 1997 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 DLEU2L-201ENST00000371086 3555 ntBASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.96□□□□□ -0.97
TRIM35Q9UPQ4 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 Y_RNA.210-201ENST00000364161 110 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 Y_RNA.506-201ENST00000384494 102 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 AC017035.1-201ENST00000411999 1115 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 VDAC1P9-201ENST00000412766 841 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 RPLP1P10-201ENST00000413972 339 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 GJA6P-201ENST00000415117 1042 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 BOLA3P4-201ENST00000418151 400 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 AL590128.1-201ENST00000433407 286 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 RN7SL492P-201ENST00000460700 295 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 RN7SL834P-201ENST00000461450 286 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 RN7SL790P-201ENST00000474043 298 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 RN7SL350P-201ENST00000492591 299 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 RPL37P23-201ENST00000492641 294 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 RNA5SP454-201ENST00000517231 127 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 MIR378C-201ENST00000578683 81 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 MRO-208ENST00000588444 866 ntTSL 3 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 AL513327.3-201ENST00000602618 469 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 AL590032.1-201ENST00000604920 252 ntBASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM35Q9UPQ4 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC011379.1-201ENST00000508713 3025 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 RNU6-38P-201ENST00000384085 107 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AL353133.1-201ENST00000407695 401 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 COX6CP15-201ENST00000426313 211 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 SLC25A18P1-201ENST00000449385 454 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 RPL37P3-201ENST00000456825 293 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 RNU6-333P-201ENST00000459117 107 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 RN7SL187P-201ENST00000495587 303 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 RNU6-1308P-201ENST00000516817 103 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 IGHVIII-11-1-201ENST00000522733 267 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AP002770.2-201ENST00000543613 532 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC008126.1-201ENST00000549019 480 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AC024614.2-201ENST00000577584 372 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AL031176.1-201ENST00000604554 466 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM35Q9UPQ4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms