Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC009951.1-201ENST00000623674 2614 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 EIF2AP4-201ENST00000424793 1781 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC093775.1-201ENST00000624154 1868 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AP000756.2-201ENST00000624168 2567 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 NPM1P10-201ENST00000398310 865 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 RN7SKP199-201ENST00000410325 305 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC011933.1-201ENST00000413334 321 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AL139095.3-201ENST00000419672 1203 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC007563.3-201ENST00000433233 371 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 RPS3AP54-201ENST00000435535 734 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 ACTR3P2-201ENST00000439585 1257 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 RPS26P2-201ENST00000440331 348 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC114495.1-201ENST00000441274 436 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 Z99127.2-201ENST00000441426 334 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 RPL21P133-201ENST00000443666 476 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AL133244.1-201ENST00000456007 258 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC116533.1-201ENST00000459748 321 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC022795.1-201ENST00000473808 480 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC037198.2-201ENST00000478845 733 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 IGBP1P5-201ENST00000507524 1000 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC106806.2-201ENST00000509365 500 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 RPS27AP18-201ENST00000515536 459 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 OR8X1P-201ENST00000534542 869 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 CD24P2-201ENST00000565486 219 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 MIR3138-201ENST00000585238 82 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 IMMP1LP1-201ENST00000605170 488 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 BX322635.1-201ENST00000605804 496 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC005021.1-201ENST00000608730 355 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC114781.5-201ENST00000615297 108 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC009032.1-201ENST00000617574 431 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AC234782.5-201ENST00000617723 324 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 uc_338.13-201ENST00000618243 179 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 MAPK10-304ENST00000641341 3984 ntBASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCF1Q9UBD9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 MIR421-201ENST00000365696 85 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 MIR3065-201ENST00000390137 79 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 GSTA12P-201ENST00000402398 508 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AL589655.1-201ENST00000405398 482 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 RPL21P108-201ENST00000413857 481 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 EIF4A1P1-201ENST00000420241 934 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC114878.1-201ENST00000441166 358 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 PPIAP21-201ENST00000464473 501 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC112206.1-201ENST00000468416 477 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC010618.1-201ENST00000469924 477 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms