Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 SNX18P3-202ENST00000565670 1750 ntBASIC4.16□□□□□ -1.74
CHD7Q9P2D1 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 DHX9P1-201ENST00000436565 3076 ntBASIC4.16□□□□□ -1.74
CHD7Q9P2D1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 RNA5SP249-201ENST00000516127 99 ntBASIC4.16□□□□□ -1.74
CHD7Q9P2D1 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 AC135507.2-201ENST00000612443 309 ntBASIC4.16□□□□□ -1.74
CHD7Q9P2D1 MIR7112-201ENST00000616126 65 ntBASIC4.16□□□□□ -1.74
CHD7Q9P2D1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.16□□□□□ -1.74
CHD7Q9P2D1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.15□□□□□ -1.74
CHD7Q9P2D1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CHD7Q9P2D1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CHD7Q9P2D1 RBMY1KP-201ENST00000423480 476 ntBASIC4.15□□□□□ -1.74
CHD7Q9P2D1 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.15□□□□□ -1.74
CHD7Q9P2D1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.15□□□□□ -1.74
CHD7Q9P2D1 RPS4XP12-201ENST00000461747 709 ntBASIC4.15□□□□□ -1.74
CHD7Q9P2D1 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CHD7Q9P2D1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.15□□□□□ -1.74
CHD7Q9P2D1 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.15□□□□□ -1.74
CHD7Q9P2D1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.15□□□□□ -1.74
CHD7Q9P2D1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 AL031666.3-201ENST00000609320 1006 ntBASIC4.15□□□□□ -1.75
CHD7Q9P2D1 MIR8058-201ENST00000615737 89 ntBASIC4.15□□□□□ -1.75
CHD7Q9P2D1 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CHD7Q9P2D1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 AC127537.2-201ENST00000439258 465 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 RPL21P23-201ENST00000446654 460 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 RAD23BP3-201ENST00000454157 1152 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 SNX6P1-201ENST00000601728 1224 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 AC064801.1-201ENST00000612025 407 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 AL021877.2-201ENST00000624442 10684 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 RNA5SP51-201ENST00000364750 119 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 RPS26P4-201ENST00000431743 355 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 RANP9-201ENST00000519957 271 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 AC087369.1-201ENST00000520775 996 ntBASIC4.14□□□□□ -1.75
CHD7Q9P2D1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.14□□□□□ -1.75
CHD7Q9P2D1 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 AC005326.1-201ENST00000429197 123 ntBASIC4.13□□□□□ -1.75
CHD7Q9P2D1 AGGF1P3-201ENST00000493675 1213 ntBASIC4.13□□□□□ -1.75
CHD7Q9P2D1 PRELID3BP6-201ENST00000503839 571 ntBASIC4.13□□□□□ -1.75
CHD7Q9P2D1 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 OR8I1P-201ENST00000529291 931 ntBASIC4.13□□□□□ -1.75
CHD7Q9P2D1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 AL161912.2-201ENST00000565707 3007 ntBASIC4.13□□□□□ -1.75
CHD7Q9P2D1 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 RPS3AP46-201ENST00000448352 682 ntBASIC4.13□□□□□ -1.75
CHD7Q9P2D1 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.13□□□□□ -1.75
CHD7Q9P2D1 MIR4513-201ENST00000581077 86 ntBASIC4.13□□□□□ -1.75
CHD7Q9P2D1 CR392039.4-201ENST00000624968 501 ntBASIC4.13□□□□□ -1.75
CHD7Q9P2D1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms