Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC073343.1-201ENST00000328239 651 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 Y_RNA.31-201ENST00000362574 102 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RNU6-223P-201ENST00000362830 107 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RNA5SP114-201ENST00000363780 113 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RNU12-2P-201ENST00000364789 156 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RN7SKP55-201ENST00000364888 307 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RNA5SP172-201ENST00000365061 118 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RNY4P36-201ENST00000391116 96 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RNU1-56P-201ENST00000391303 164 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 GAPDHP42-201ENST00000406848 981 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RNU6-1148P-201ENST00000410992 104 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 MTCYBP10-201ENST00000424905 650 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RPL7P4-203ENST00000430239 730 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 ATP5JP1-201ENST00000431631 322 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC010301.1-201ENST00000473936 355 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RN7SL790P-201ENST00000474043 298 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RPL21P6-201ENST00000479171 504 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC068587.1-201ENST00000483613 781 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RPS3AP50-201ENST00000487064 803 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC106872.3-201ENST00000495104 446 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 RPL38P4-201ENST00000502376 214 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 SCARNA6-201ENST00000515982 265 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 MIR4800-201ENST00000537353 80 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC010525.2-201ENST00000590920 195 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC019257.2-201ENST00000605539 497 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AP000654.2-201ENST00000605633 586 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC097468.3-201ENST00000607956 456 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 uc_338.22-201ENST00000622722 187 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC012629.3-201ENST00000623397 328 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 Z69720.2-201ENST00000624755 279 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 U2.22-201ENST00000636441 106 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AL596275.2-203ENST00000641951 371 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC093775.1-201ENST00000624154 1868 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AL355488.2-201ENST00000609909 2850 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AL034546.1-201ENST00000623740 3693 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CUEDC1Q9NWM3 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
CUEDC1Q9NWM3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 RNU1-35P-201ENST00000362782 153 ntBASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-1120P-201ENST00000362988 108 ntBASIC6.77□□□□□ -1.33
CUEDC1Q9NWM3 ARSFP1-201ENST00000398758 477 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms