Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL158825.1-201ENST00000414735 521 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AL590762.4-201ENST00000425885 253 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC007559.1-201ENST00000428736 355 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 HMGB3P10-201ENST00000434734 572 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC093716.1-201ENST00000435923 377 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 MED6P1-201ENST00000439659 713 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 ARL4AP3-201ENST00000441452 574 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 RPS27P5-201ENST00000444247 244 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 RPS3AP41-201ENST00000462701 778 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 RPL21P18-201ENST00000469899 480 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 RPS17P11-201ENST00000474297 293 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 RPL21P47-201ENST00000483696 477 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 DEFB109F-201ENST00000491870 277 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC096571.1-202ENST00000506634 735 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC104229.1-201ENST00000561364 255 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 MIR5699-201ENST00000578903 90 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 MIR3934-201ENST00000579806 107 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 MIR4436B2-201ENST00000581415 91 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 MIR4436B1-201ENST00000583272 91 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 SNX6P1-201ENST00000601728 1224 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC025175.1-201ENST00000606482 759 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 OR7A19P-201ENST00000608051 733 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC019131.2-201ENST00000609071 870 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC245100.7-201ENST00000609678 442 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AL590396.4-201ENST00000636779 956 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 MTND5P11-201ENST00000511037 1812 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 MAPK10-286ENST00000641208 8747 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC108751.5-201ENST00000492880 1336 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC008432.1-201ENST00000615912 1320 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AL031119.1-201ENST00000404707 1879 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC107027.3-201ENST00000565095 3473 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 OR56B2P-201ENST00000317102 954 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 MIR550A3-201ENST00000390735 95 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 HMGB1P10-201ENST00000395823 563 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 RN7SKP199-201ENST00000410325 305 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AL590806.1-201ENST00000415818 853 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC008173.1-201ENST00000418901 264 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC241520.1-201ENST00000422654 1099 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC093084.1-201ENST00000424233 687 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC104837.2-201ENST00000427236 424 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 LYPLA1P1-201ENST00000434514 622 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 PPIAP13-201ENST00000434706 478 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AL157827.1-201ENST00000447622 132 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC010733.1-201ENST00000451515 401 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC025164.1-201ENST00000496249 478 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC010374.1-201ENST00000503762 1237 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 BRD9P1-201ENST00000529855 560 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH9Q9HC56 RPL21P7-201ENST00000557463 483 ntBASIC4.86□□□□□ -1.63
PCDH9Q9HC56 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms