Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AL031119.1-201ENST00000404707 1879 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 RNU6-353P-201ENST00000364266 108 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 LRRC37BP1-201ENST00000398851 714 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 MTCO2P31-201ENST00000402702 684 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 CTSL3P-202ENST00000412179 788 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC023347.2-201ENST00000433994 462 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 HMGB1P45-201ENST00000435986 653 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC234064.1-201ENST00000436312 247 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 MTND6P18-201ENST00000439477 513 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 PTGES3P1-201ENST00000439531 483 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC245047.2-201ENST00000441060 530 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 RPS17P2-201ENST00000461663 408 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC015724.1-201ENST00000478577 156 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 RN7SL591P-201ENST00000496150 292 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC010460.2-201ENST00000509054 677 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC106872.4-201ENST00000510050 523 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 RNU6-513P-201ENST00000516104 104 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 BPTFP1-201ENST00000579209 492 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC011447.4-201ENST00000587562 111 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC093765.1-201ENST00000603758 881 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 MIR6768-201ENST00000610734 72 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AP002505.2-201ENST00000623585 696 ntBASIC4.82□□□□□ -1.64
BRF2Q9HAW0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC025263.3-201ENST00000622965 1396 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 DDX18P3-201ENST00000404856 2007 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 SNORA73.1-201ENST00000363107 205 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 HNRNPDP2-201ENST00000406475 478 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AL449283.1-202ENST00000418249 604 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AL450263.2-201ENST00000439400 589 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 RRM2P4-201ENST00000441721 562 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 OR7E125P-201ENST00000443450 846 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC233982.1-201ENST00000451247 436 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AL691482.1-201ENST00000453255 87 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC244505.3-201ENST00000454598 187 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 RN7SL172P-201ENST00000460535 303 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC117394.1-201ENST00000477323 567 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 SNRPCP2-201ENST00000504370 475 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 HPRT1P1-201ENST00000509498 657 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 RPL7L1P13-201ENST00000511702 739 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 ENPP7P9-201ENST00000514456 627 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 SNORD116-26-201ENST00000516006 96 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC034205.1-201ENST00000520621 638 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF2Q9HAW0 AC012339.2-201ENST00000523996 453 ntBASIC4.81□□□□□ -1.64
BRF2Q9HAW0 OR8I1P-201ENST00000529291 931 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 327.9 ms