Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 Y_RNA.58-201ENST00000362807 102 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 Y_RNA.154-201ENST00000363624 102 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 Y_RNA.157-201ENST00000363638 102 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 RNY3P1-201ENST00000365085 102 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 RNY3-201ENST00000365484 102 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 Y_RNA.490-201ENST00000384413 102 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AP003170.5-201ENST00000397185 335 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 PDCL2P1-201ENST00000419302 352 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC000089.1-201ENST00000424559 801 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 OR51AB1P-201ENST00000429046 620 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 RPL31P15-201ENST00000449770 338 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 SBDSP1-204ENST00000453858 737 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 RPS15AP1-201ENST00000457423 391 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC090142.1-201ENST00000465776 462 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC005017.1-201ENST00000482002 490 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC091965.3-201ENST00000506236 208 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 Vault.3-201ENST00000516676 95 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 PMS2P3-207ENST00000529061 717 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC090515.3-201ENST00000560431 315 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC034105.3-201ENST00000565294 442 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 MIR378H-201ENST00000579966 83 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 OR7E19P-202ENST00000589942 844 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC243960.4-201ENST00000600532 288 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 MIR6070-201ENST00000613967 103 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC002550.2-201ENST00000621246 394 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 AC005858.3-201ENST00000624756 589 ntBASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
BHLHE41Q9C0J9 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC011455.2-201ENST00000599320 3336 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC105235.1-201ENST00000623208 1816 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 FRG1BP-201ENST00000278882 761 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 FRG1CP-201ENST00000358464 769 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 RNA5SP429-201ENST00000363688 109 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 Y_RNA.431-201ENST00000384086 102 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC234782.4-201ENST00000417646 1048 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 MTND2P23-201ENST00000422990 651 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC003989.1-201ENST00000434569 565 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 HMGN1P36-201ENST00000446623 298 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 HMGB1P7-201ENST00000450921 612 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC022730.1-201ENST00000473114 568 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 RN7SL612P-201ENST00000497704 295 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC093878.1-201ENST00000515630 432 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AC008429.2-201ENST00000523057 864 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 PHBP17-201ENST00000528576 541 ntBASIC6.2□□□□□ -1.42
BHLHE41Q9C0J9 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms