Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SMOQ99835 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SMOQ99835 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SMOQ99835 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
SMOQ99835 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SMOQ99835 SNORA74A-201ENST00000364089 198 ntBASIC5.39□□□□□ -1.55
SMOQ99835 RNA5SP455-201ENST00000365190 119 ntBASIC5.39□□□□□ -1.55
SMOQ99835 BMS1P3-201ENST00000372011 932 ntBASIC5.39□□□□□ -1.55
SMOQ99835 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
SMOQ99835 RNU6-157P-201ENST00000383957 107 ntBASIC5.39□□□□□ -1.55
SMOQ99835 Y_RNA.436-201ENST00000384097 102 ntBASIC5.39□□□□□ -1.55
SMOQ99835 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 RPL12P9-201ENST00000412942 488 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.39□□□□□ -1.55
SMOQ99835 GJA6P-201ENST00000415117 1042 ntBASIC5.39□□□□□ -1.55
SMOQ99835 LINC01881-201ENST00000416103 412 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AL365203.2-201ENST00000423444 196 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AL593851.1-201ENST00000426171 157 ntBASIC5.39□□□□□ -1.55
SMOQ99835 OR5AW1P-201ENST00000426334 1006 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.39□□□□□ -1.55
SMOQ99835 CACYBPP1-201ENST00000438592 684 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC118469.1-201ENST00000442943 488 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AL929288.2-201ENST00000446368 407 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.39□□□□□ -1.55
SMOQ99835 GAPDHP14-201ENST00000450472 937 ntBASIC5.39□□□□□ -1.55
SMOQ99835 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 AC011979.1-201ENST00000472300 483 ntBASIC5.39□□□□□ -1.55
SMOQ99835 RN7SL826P-201ENST00000479724 288 ntBASIC5.39□□□□□ -1.55
SMOQ99835 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.39□□□□□ -1.55
SMOQ99835 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.39□□□□□ -1.55
SMOQ99835 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.39□□□□□ -1.55
SMOQ99835 AC104108.1-201ENST00000509930 412 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC016559.2-201ENST00000510759 359 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC117532.1-201ENST00000514638 323 ntBASIC5.39□□□□□ -1.55
SMOQ99835 MTND4LP31-201ENST00000514859 294 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.39□□□□□ -1.55
SMOQ99835 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.39□□□□□ -1.55
SMOQ99835 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC087465.1-201ENST00000560574 245 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC022884.2-201ENST00000578535 580 ntBASIC5.39□□□□□ -1.55
SMOQ99835 MTCYBP13-201ENST00000578634 1093 ntBASIC5.39□□□□□ -1.55
SMOQ99835 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SMOQ99835 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SMOQ99835 AC068790.2-201ENST00000602601 557 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.39□□□□□ -1.55
SMOQ99835 AC092608.3-201ENST00000625017 386 ntBASIC5.39□□□□□ -1.55
SMOQ99835 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SMOQ99835 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
SMOQ99835 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SMOQ99835 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.39□□□□□ -1.55
SMOQ99835 AL049737.1-201ENST00000413920 1403 ntBASIC5.39□□□□□ -1.55
SMOQ99835 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMOQ99835 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.39□□□□□ -1.55
SMOQ99835 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.39□□□□□ -1.55
SMOQ99835 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 TTC39DP-201ENST00000416781 1688 ntBASIC5.38□□□□□ -1.55
SMOQ99835 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SMOQ99835 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 AC004158.1-201ENST00000564508 4319 ntBASIC5.38□□□□□ -1.55
SMOQ99835 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.38□□□□□ -1.55
SMOQ99835 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SMOQ99835 Y_RNA.192-201ENST00000363977 102 ntBASIC5.38□□□□□ -1.55
SMOQ99835 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SMOQ99835 RNU6-98P-201ENST00000384173 107 ntBASIC5.38□□□□□ -1.55
SMOQ99835 Y_RNA.465-201ENST00000384293 102 ntBASIC5.38□□□□□ -1.55
SMOQ99835 AL390316.1-201ENST00000406279 553 ntBASIC5.38□□□□□ -1.55
SMOQ99835 RNA5SP498-201ENST00000411342 120 ntBASIC5.38□□□□□ -1.55
SMOQ99835 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.38□□□□□ -1.55
SMOQ99835 NPM1P22-201ENST00000427761 952 ntBASIC5.38□□□□□ -1.55
SMOQ99835 RBMY2QP-201ENST00000429799 1147 ntBASIC5.38□□□□□ -1.55
SMOQ99835 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.38□□□□□ -1.55
SMOQ99835 RPL7P29-201ENST00000437151 728 ntBASIC5.38□□□□□ -1.55
SMOQ99835 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.38□□□□□ -1.55
SMOQ99835 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.38□□□□□ -1.55
SMOQ99835 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMOQ99835 RN7SL443P-201ENST00000464331 290 ntBASIC5.38□□□□□ -1.55
SMOQ99835 MTND3P7-201ENST00000474435 343 ntBASIC5.38□□□□□ -1.55
SMOQ99835 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.38□□□□□ -1.55
SMOQ99835 AC111000.2-201ENST00000507775 550 ntBASIC5.38□□□□□ -1.55
SMOQ99835 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.38□□□□□ -1.55
SMOQ99835 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.38□□□□□ -1.55
SMOQ99835 AC097486.1-201ENST00000515331 210 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms