Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 MIR448-201ENST00000362131 111 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 RHOT1P2-201ENST00000366423 333 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC019155.1-201ENST00000382242 574 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 NCSTNP1-201ENST00000406229 144 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 OR6C71P-201ENST00000432580 913 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 MTCO3P17-201ENST00000443775 513 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC022431.1-201ENST00000450941 438 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 OR6C72P-201ENST00000451403 892 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 SNORD116-30-201ENST00000516468 85 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC084783.1-201ENST00000565846 910 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AL356218.2-201ENST00000605264 187 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AL158196.1-201ENST00000616786 434 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 MIR6758-201ENST00000620653 63 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC015908.5-201ENST00000623289 343 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC002044.3-201ENST00000623314 541 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 AC019278.1-201ENST00000623516 479 ntBASIC4.47□□□□□ -1.69
C9orf72Q96LT7 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
C9orf72Q96LT7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.46□□□□□ -1.69
C9orf72Q96LT7 AC125257.1-201ENST00000560400 2930 ntBASIC4.46□□□□□ -1.69
C9orf72Q96LT7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
C9orf72Q96LT7 AC087190.4-201ENST00000574616 8334 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 IGKV7-3-201ENST00000357453 298 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 RNA5SP447-201ENST00000363749 119 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 MIR93-201ENST00000385024 80 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 U3.22-201ENST00000391120 215 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 SNORD66.1-201ENST00000391230 76 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 SDHCP2-201ENST00000398565 501 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 SNRPFP1-201ENST00000414761 252 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 P2RY10P2-201ENST00000416730 913 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 RPS12P5-201ENST00000423449 371 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC091390.1-201ENST00000433904 331 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AP000936.3-201ENST00000438127 255 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 SERPINA7P1-201ENST00000443077 631 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 Z95152.1-201ENST00000453556 656 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 RPS23P7-201ENST00000466210 444 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 RN7SL385P-201ENST00000468873 276 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC013356.1-201ENST00000489027 564 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 HMGB3P13-201ENST00000511263 607 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC008638.3-201ENST00000603341 463 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC008782.1-201ENST00000603386 430 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC005191.1-201ENST00000603950 358 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 GMCL1P2-201ENST00000605230 823 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AL133243.1-201ENST00000614487 366 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC083809.1-201ENST00000615051 472 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 AC068254.2-201ENST00000623938 3577 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.46□□□□□ -1.7
C9orf72Q96LT7 ZNF962P-201ENST00000443465 3140 ntBASIC4.46□□□□□ -1.7
C9orf72Q96LT7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 RPL32P3-201ENST00000359025 275 ntBASIC4.45□□□□□ -1.7
C9orf72Q96LT7 RNU4-39P-201ENST00000362455 127 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms