Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 SNORA2.3-201ENST00000383920 135 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 RN7SKP229-201ENST00000410465 302 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 HMGN2P27-201ENST00000427352 270 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 NANOGP2-201ENST00000435391 727 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC002542.1-201ENST00000440683 193 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC068135.1-201ENST00000446164 246 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC005229.2-201ENST00000456995 399 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 RNU6-1218P-201ENST00000458990 108 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC069528.1-202ENST00000482888 637 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC005912.1-201ENST00000495392 255 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 RN7SKP260-201ENST00000516907 149 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 IGKV2D-10-201ENST00000520194 281 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 POLR2KP1-201ENST00000553226 168 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC023813.2-201ENST00000564321 469 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 PCNAP1-202ENST00000595299 752 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 ZNF92P3-201ENST00000596594 954 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC123786.2-201ENST00000603459 275 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC018695.5-201ENST00000605872 315 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AP002782.1-201ENST00000623107 614 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 AL137100.1-201ENST00000556703 1620 ntBASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP3Q96JB5 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AP000756.2-201ENST00000624168 2567 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 RNU6-171P-201ENST00000384354 107 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 MIR525-201ENST00000384978 85 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 RN7SKP114-201ENST00000410327 279 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC092745.2-202ENST00000411880 369 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 HIGD1AP4-201ENST00000430194 280 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC112492.1-201ENST00000449607 712 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 RPS26P39-201ENST00000469206 341 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 snoZ278.1-201ENST00000517059 112 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 MTCO3P15-201ENST00000526563 574 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 NDUFB4P11-201ENST00000560510 395 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC145350.1-201ENST00000567426 208 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 MTCO1P40-201ENST00000574371 625 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AC061975.8-201ENST00000587058 721 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 VN1R78P-201ENST00000597393 564 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 MTND3P19-201ENST00000603825 345 ntBASIC5.73□□□□□ -1.49
CDK5RAP3Q96JB5 AL445423.1-201ENST00000609941 536 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms