Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 Y_RNA.482-201ENST00000384377 111 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 AL121835.1-201ENST00000404250 354 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 HMGN1P20-201ENST00000411849 300 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 SKA2P1-201ENST00000425592 390 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 RPL7L1P10-201ENST00000427790 463 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 AL731534.1-201ENST00000434711 269 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 RPL31P44-201ENST00000447680 377 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 HMGB1P7-201ENST00000450921 612 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 RNU6-1132P-201ENST00000459214 107 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC126389.1-201ENST00000477436 290 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 TRBVA-201ENST00000498804 316 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 AK3P4-201ENST00000504283 583 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 RNU6-138P-201ENST00000515952 107 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC104687.2-201ENST00000604442 342 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 AC121334.2-201ENST00000605387 271 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 OR10AB1P-201ENST00000609613 938 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 AL121809.2-201ENST00000613169 341 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 AL669831.3-213ENST00000636676 183 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 AL158163.1-201ENST00000603915 1649 ntBASIC7.6□□□□□ -1.19
LRCH3Q96II8 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 MAPK10-357ENST00000641831 2858 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 AL359672.1-201ENST00000442302 409 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 RPSAP7-201ENST00000456871 885 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 RNU7-136P-201ENST00000458819 69 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 RN7SL751P-201ENST00000473281 284 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 AC058823.1-201ENST00000485315 474 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 RPS27P23-201ENST00000487608 251 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 AC073610.1-201ENST00000489971 396 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 RPS27P27-201ENST00000498779 255 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 SCARNA24.1-201ENST00000516465 137 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 UBE2CP1-201ENST00000557130 554 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 AC090312.2-201ENST00000582687 378 ntBASIC7.59□□□□□ -1.19
LRCH3Q96II8 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LRCH3Q96II8 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LRCH3Q96II8 AL133320.1-201ENST00000621423 2352 ntBASIC7.59□□□□□ -1.2
LRCH3Q96II8 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.59□□□□□ -1.2
LRCH3Q96II8 AC090017.1-201ENST00000548612 1779 ntBASIC7.59□□□□□ -1.2
LRCH3Q96II8 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC068870.3-201ENST00000625077 2536 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AL355974.1-201ENST00000618896 1708 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms