Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CR392039.4-201ENST00000624968 501 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 MIR6715B-201ENST00000637172 77 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 CASC19-264ENST00000641912 1184 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 IRF5P1-201ENST00000504852 2164 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.28□□□□□ -1.72
RFT1Q96AA3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFT1Q96AA3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFT1Q96AA3 AC017104.4-201ENST00000636283 1592 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 EOGT-210ENST00000615922 1931 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFT1Q96AA3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFT1Q96AA3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 VDAC1P9-201ENST00000412766 841 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 NPM1P4-201ENST00000414095 812 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 EIF4EP1-201ENST00000422311 642 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC073069.1-201ENST00000428657 441 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC004938.1-201ENST00000438468 308 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 SPRYD7P1-201ENST00000443861 570 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 TDGF1P1-201ENST00000445734 527 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 OR2AO1P-201ENST00000476497 403 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 SMARCE1P4-201ENST00000523647 241 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 CYCSP28-201ENST00000534284 321 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFT1Q96AA3 OR11J2P-201ENST00000555298 907 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC084757.1-201ENST00000559987 490 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC027104.1-201ENST00000563702 681 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 MTATP6P2-201ENST00000603319 678 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 COX6CP4-201ENST00000605798 228 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC026741.1-201ENST00000605892 482 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AL592437.2-201ENST00000421655 2434 ntBASIC4.27□□□□□ -1.73
RFT1Q96AA3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.27□□□□□ -1.73
RFT1Q96AA3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFT1Q96AA3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFT1Q96AA3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AL353743.4-201ENST00000422653 1547 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC092162.3-201ENST00000624511 1624 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 RNA5SP183-201ENST00000362452 119 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 SNORA17.1-201ENST00000362945 126 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 RNA5SP27-201ENST00000363839 119 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFT1Q96AA3 GCNT6-201ENST00000379591 934 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 RPL23AP59-201ENST00000399415 461 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 ACTR3P2-201ENST00000439585 1257 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC245047.2-201ENST00000441060 530 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC068135.1-201ENST00000446164 246 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AL096829.2-201ENST00000446582 742 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC239809.1-201ENST00000450470 217 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 IGHV5-78-201ENST00000450948 295 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC092647.2-201ENST00000452998 253 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 RN7SL174P-201ENST00000475578 289 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC092902.1-201ENST00000486999 259 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 RPL7P51-201ENST00000490532 749 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC104629.1-201ENST00000494226 508 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC083923.1-201ENST00000523708 376 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms