Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 VTA1P2-201ENST00000520205 911 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 MIR548Y-201ENST00000582739 110 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 RN7SL52P-201ENST00000584271 284 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC091178.1-203ENST00000584586 279 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC211433.2-201ENST00000608433 387 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AP001033.2-201ENST00000609701 1003 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 MIR7155-201ENST00000615925 56 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC016957.2-201ENST00000616998 848 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AL596275.2-204ENST00000641628 552 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AL596275.2-206ENST00000641957 626 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 PHKBP1-201ENST00000450951 1951 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 HSPD1P14-201ENST00000432666 1618 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AL391684.1-202ENST00000641293 1636 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC090017.1-201ENST00000548612 1779 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 RPL6P29-201ENST00000414863 865 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 GAPDHP49-201ENST00000421421 961 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC004074.1-201ENST00000421810 1063 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AL158073.1-201ENST00000426848 1104 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AL390879.2-203ENST00000426943 1121 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC092013.1-201ENST00000438795 332 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC073648.4-201ENST00000442655 781 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 RPL31P44-201ENST00000447680 377 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC108022.1-201ENST00000493466 478 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC008638.1-201ENST00000506035 866 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 MTND3P24-201ENST00000506306 329 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC025768.1-201ENST00000510057 267 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AP001922.4-201ENST00000526967 290 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AL110118.1-201ENST00000553543 400 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC025918.2-201ENST00000558683 763 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 MIR3934-201ENST00000579806 107 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC116447.1-201ENST00000613153 453 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 MIR7973-1-201ENST00000614683 76 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 MIR6853-201ENST00000619642 74 ntBASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF3IP1Q8TDR0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 AC096656.1-201ENST00000623826 1364 ntBASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 AP001002.1-201ENST00000625148 1513 ntBASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 RNU6-252P-201ENST00000363232 107 ntBASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 RN7SKP278-201ENST00000410504 342 ntBASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 RN7SKP100-201ENST00000411258 284 ntBASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 OR51B3P-201ENST00000412287 913 ntBASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 VDAC1P9-201ENST00000412766 841 ntBASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 XKRYP4-201ENST00000414395 483 ntBASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 AL035458.1-201ENST00000433096 585 ntBASIC4.78□□□□□ -1.64
TRAF3IP1Q8TDR0 PSMD10P3-201ENST00000437000 448 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms