Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 DDX39BP1-205ENST00000422507 192 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 RPS27AP12-201ENST00000429552 465 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC087650.1-201ENST00000431445 468 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AL138899.2-201ENST00000439139 499 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AL512637.1-201ENST00000439523 1231 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC019185.1-201ENST00000442718 389 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 DDX39BP2-208ENST00000453923 258 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC089999.1-201ENST00000460336 374 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 TRIM36-IT1-201ENST00000503723 881 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 RNA5SP446-201ENST00000515955 82 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 RNA5SP75-201ENST00000516841 111 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 RPL12P22-201ENST00000519073 490 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 MIR4502-201ENST00000580432 81 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC209154.1-201ENST00000582156 337 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 ADAD1P2-201ENST00000588476 646 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC023762.1-201ENST00000603280 584 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 MIR432-201ENST00000606207 94 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC010424.2-201ENST00000607594 443 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC211486.4-201ENST00000621495 113 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 AC105074.1-201ENST00000623380 3095 ntBASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC2.33□□□□□ -2.04
SPTSSBQ8NFR3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 SRP72P2-201ENST00000344851 1979 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 BDP1P-201ENST00000582658 1990 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 RNA5SP122-201ENST00000384457 108 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 MT-TP-201ENST00000387461 68 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 RAB5CP1-201ENST00000395972 580 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 CALM1P2-201ENST00000452941 448 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 PTGES3P5-201ENST00000455109 434 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AC004890.1-201ENST00000461005 181 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 RPL21P103-201ENST00000479921 488 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 RBBP4P1-201ENST00000502424 1276 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AC025554.1-201ENST00000505641 188 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AC025458.1-201ENST00000506046 166 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 Y_RNA.667-201ENST00000516212 107 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 FKBP1BP1-201ENST00000553366 325 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 RBM22P1-201ENST00000578589 1214 ntBASIC2.32□□□□□ -2.04
SPTSSBQ8NFR3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms