Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC073055.1-201ENST00000456901 1621 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 SNORA70F-201ENST00000384142 135 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 MIR525-201ENST00000384978 85 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 SNORA48.4-201ENST00000391089 134 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 MIR1193-201ENST00000408109 78 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 SNORA77-201ENST00000408716 125 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 LIPT1P1-201ENST00000415870 1186 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 GNG5P5-201ENST00000420444 220 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 RPL23AP1-201ENST00000428990 471 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC002542.1-201ENST00000440683 193 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 ARL5AP2-201ENST00000444698 533 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 NPM1P39-201ENST00000449818 867 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 CEACAMP6-201ENST00000452007 574 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 NUTF2P7-201ENST00000453086 375 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 RPL7P32-201ENST00000457119 744 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 RPS4XP6-201ENST00000477670 797 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC083829.1-201ENST00000503756 657 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 HPRT1P2-201ENST00000505250 544 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC068714.1-201ENST00000559623 800 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC084759.1-201ENST00000561168 290 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 VN1R87P-201ENST00000596706 487 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC015726.3-201ENST00000624501 418 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC006210.2-201ENST00000367074 1545 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC133552.1-201ENST00000569988 4007 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 ENSAP3-201ENST00000312710 333 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 SNORA2.3-201ENST00000383920 135 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 RNU6-932P-201ENST00000391108 106 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AL049697.2-201ENST00000403708 294 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC092745.2-202ENST00000411880 369 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 RPL19P16-201ENST00000433839 588 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC092447.2-201ENST00000435487 669 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 CBX1P4-201ENST00000439415 457 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AL592437.1-201ENST00000443781 492 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 RPL23AP56-201ENST00000460778 453 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 PPIAP21-201ENST00000464473 501 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 RN7SL41P-201ENST00000476144 297 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC104982.1-201ENST00000478775 574 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC026414.1-201ENST00000504046 698 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC118942.1-201ENST00000529674 1035 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 TVP23CP2-201ENST00000571473 623 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC103792.1-201ENST00000603591 919 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AL356218.2-201ENST00000605264 187 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC026979.4-201ENST00000606555 645 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 Z95327.3-201ENST00000610385 572 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AC068724.3-201ENST00000625906 87 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.37□□□□□ -1.55
HERC6Q8IVU3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HERC6Q8IVU3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms