Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC020893.1-201ENST00000502452 580 ntBASIC2.82□□□□□ -1.96
CSMD3Q7Z407 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 DHX9P1-201ENST00000436565 3076 ntBASIC2.82□□□□□ -1.96
CSMD3Q7Z407 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AL512649.1-201ENST00000428997 581 ntBASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AC027309.2-201ENST00000520566 192 ntBASIC2.82□□□□□ -1.96
CSMD3Q7Z407 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 RNU2-65P-201ENST00000410162 185 ntBASIC2.82□□□□□ -1.96
CSMD3Q7Z407 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AL353726.1-201ENST00000614041 1000 ntBASIC2.82□□□□□ -1.96
CSMD3Q7Z407 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 MIR1251-201ENST00000408552 70 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 MTCO1P45-201ENST00000431457 267 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 WBP1LP4-201ENST00000505043 344 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 AL359757.2-201ENST00000624309 274 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 Z74696.2-201ENST00000436514 498 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 RPL21P8-201ENST00000465083 535 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 CASC19-203ENST00000523510 575 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 MTCO3P22-201ENST00000603219 784 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 AC135507.2-201ENST00000612443 309 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 AL133383.2-201ENST00000622958 2336 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 AL078604.1-201ENST00000404609 466 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 TCEA1P2-201ENST00000420496 906 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 BNIP3P41-201ENST00000503774 571 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 KRT19P6-201ENST00000510983 209 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 MIR3945-201ENST00000581853 98 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.81□□□□□ -1.96
CSMD3Q7Z407 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC2.81□□□□□ -1.96
CSMD3Q7Z407 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 ANKRD36P1-201ENST00000344424 659 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms