Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RMST_9.1-201ENST00000619945 193 ntBASIC5.32□□□□□ -1.56
CTR9Q6PD62 AC011944.2-201ENST00000624440 683 ntBASIC5.32□□□□□ -1.56
CTR9Q6PD62 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.32□□□□□ -1.56
CTR9Q6PD62 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.32□□□□□ -1.56
CTR9Q6PD62 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.32□□□□□ -1.56
CTR9Q6PD62 CR382285.2-201ENST00000624662 1495 ntBASIC5.32□□□□□ -1.56
CTR9Q6PD62 AL672167.1-203ENST00000641299 2975 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTR9Q6PD62 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTR9Q6PD62 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTR9Q6PD62 HDGFP1-201ENST00000405943 252 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 AC098592.2-201ENST00000413158 265 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 COX6CP17-201ENST00000421389 185 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 RPL21P91-201ENST00000429231 479 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 RPS29P17-201ENST00000430795 166 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 TRIM60P13-201ENST00000432350 1283 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 CBX1P1-201ENST00000440184 427 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 GEMIN8P3-201ENST00000445417 720 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTR9Q6PD62 C1DP3-201ENST00000455013 423 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 RPL23AP2-201ENST00000471227 466 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 PGBD4P4-201ENST00000509673 613 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 AC012467.1-201ENST00000607740 256 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 MIR6798-201ENST00000612887 67 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 AC105105.5-201ENST00000622635 1294 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 AL118508.4-201ENST00000624142 1176 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.31□□□□□ -1.56
CTR9Q6PD62 AL139254.3-201ENST00000641097 674 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTR9Q6PD62 AC139769.1-204ENST00000472297 1931 ntBASIC5.31□□□□□ -1.56
CTR9Q6PD62 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTR9Q6PD62 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTR9Q6PD62 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTR9Q6PD62 RAB28P1-201ENST00000411517 641 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 ARAFP1-201ENST00000422172 605 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 AC007064.3-201ENST00000422608 359 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 PDSS1P1-201ENST00000422953 1114 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 FAM204CP-201ENST00000424489 642 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 HSPE1P22-201ENST00000456856 327 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 RPS23P7-201ENST00000466210 444 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 MTND2P31-201ENST00000512602 616 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 AC015795.1-201ENST00000513669 327 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 SNORA70.17-201ENST00000516449 133 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTR9Q6PD62 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 AC026368.1-201ENST00000614934 690 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 AC006065.6-201ENST00000625201 545 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTR9Q6PD62 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTR9Q6PD62 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTR9Q6PD62 AC068254.2-201ENST00000623938 3577 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTR9Q6PD62 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.3□□□□□ -1.56
CTR9Q6PD62 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.3□□□□□ -1.56
CTR9Q6PD62 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTR9Q6PD62 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTR9Q6PD62 AC017104.4-201ENST00000636283 1592 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CTR9Q6PD62 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTR9Q6PD62 NXPH1-205ENST00000602349 1953 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTR9Q6PD62 ASNSP1-201ENST00000518311 1939 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 AL356489.2-201ENST00000566968 3528 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTR9Q6PD62 MIR921-201ENST00000401133 56 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 FCF1P5-201ENST00000406490 482 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.29□□□□□ -1.56
CTR9Q6PD62 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.29□□□□□ -1.56
CTR9Q6PD62 AC004448.2-201ENST00000422360 586 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.29□□□□□ -1.56
CTR9Q6PD62 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.29□□□□□ -1.56
CTR9Q6PD62 AC091390.1-201ENST00000433904 331 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CTR9Q6PD62 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.29□□□□□ -1.56
CTR9Q6PD62 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.29□□□□□ -1.56
CTR9Q6PD62 AC104306.1-201ENST00000449702 371 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 RPL10P17-201ENST00000453852 316 ntBASIC5.29□□□□□ -1.56
CTR9Q6PD62 RN7SL98P-201ENST00000462271 300 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms