Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.06□□□□□ -1.6
GABPAQ06546 AC027455.1-201ENST00000574104 594 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 AC245128.3-201ENST00000594721 748 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 AL353726.1-201ENST00000614041 1000 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 AC107308.1-201ENST00000615897 301 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
GABPAQ06546 AC019072.1-201ENST00000604535 1551 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
GABPAQ06546 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GABPAQ06546 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
GABPAQ06546 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
GABPAQ06546 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
GABPAQ06546 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GABPAQ06546 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.06□□□□□ -1.6
GABPAQ06546 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GABPAQ06546 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.05□□□□□ -1.6
GABPAQ06546 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
GABPAQ06546 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.05□□□□□ -1.6
GABPAQ06546 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GABPAQ06546 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GABPAQ06546 LINC01355-201ENST00000566551 5444 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GABPAQ06546 RNU1-44P-201ENST00000384453 163 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 SNORD96B-201ENST00000386148 79 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 NPM1P10-201ENST00000398310 865 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.05□□□□□ -1.6
GABPAQ06546 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.05□□□□□ -1.6
GABPAQ06546 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.05□□□□□ -1.6
GABPAQ06546 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.05□□□□□ -1.6
GABPAQ06546 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.05□□□□□ -1.6
GABPAQ06546 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.05□□□□□ -1.6
GABPAQ06546 PPIAP13-201ENST00000434706 478 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 EEF1A1P1-201ENST00000447052 739 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 RPL31P20-201ENST00000449593 360 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.05□□□□□ -1.6
GABPAQ06546 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
GABPAQ06546 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.05□□□□□ -1.6
GABPAQ06546 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.05□□□□□ -1.6
GABPAQ06546 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.05□□□□□ -1.6
GABPAQ06546 TVP23BP1-201ENST00000557500 617 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.05□□□□□ -1.6
GABPAQ06546 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.05□□□□□ -1.6
GABPAQ06546 MIR3936-201ENST00000584304 110 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.05□□□□□ -1.6
GABPAQ06546 MIR6867-201ENST00000610636 67 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.05□□□□□ -1.6
GABPAQ06546 CDC27P2-201ENST00000425026 1922 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 EOGT-210ENST00000615922 1931 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GABPAQ06546 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
GABPAQ06546 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
GABPAQ06546 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.05□□□□□ -1.6
GABPAQ06546 AC087565.3-202ENST00000642085 1603 ntBASIC5.05□□□□□ -1.6
GABPAQ06546 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GABPAQ06546 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GABPAQ06546 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
GABPAQ06546 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GABPAQ06546 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.04□□□□□ -1.6
GABPAQ06546 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GABPAQ06546 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.04□□□□□ -1.6
GABPAQ06546 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
GABPAQ06546 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.04□□□□□ -1.6
GABPAQ06546 MIR1911-201ENST00000410783 80 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 VDAC1P9-201ENST00000412766 841 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.04□□□□□ -1.6
GABPAQ06546 COX6B1P7-201ENST00000430845 235 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.04□□□□□ -1.6
GABPAQ06546 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.04□□□□□ -1.6
GABPAQ06546 AL356276.2-201ENST00000435919 558 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 RAB28P3-201ENST00000448325 597 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.04□□□□□ -1.6
GABPAQ06546 KCTD9P2-201ENST00000512203 1013 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 RN7SKP34-201ENST00000516142 244 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 RNA5SP360-201ENST00000516555 118 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GABPAQ06546 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.04□□□□□ -1.6
GABPAQ06546 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.04□□□□□ -1.6
GABPAQ06546 CYCSP28-201ENST00000534284 321 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.04□□□□□ -1.6
GABPAQ06546 AC006064.5-201ENST00000541782 248 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.04□□□□□ -1.6
GABPAQ06546 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.04□□□□□ -1.6
GABPAQ06546 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.04□□□□□ -1.6
GABPAQ06546 BX322635.1-201ENST00000605804 496 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 AC097505.1-201ENST00000610199 565 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 AC024941.1-201ENST00000612250 334 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 AC015922.4-201ENST00000612568 690 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 SNX18P1Y-201ENST00000616231 511 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
GABPAQ06546 AC140113.4-201ENST00000622087 222 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 AC104820.1-201ENST00000624183 307 ntBASIC5.04□□□□□ -1.6
GABPAQ06546 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
GABPAQ06546 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GABPAQ06546 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
GABPAQ06546 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GABPAQ06546 VPS35P1-201ENST00000563400 1518 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms