Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL121873.1-201ENST00000616013 524 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 AC007546.1-201ENST00000619452 559 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 MIR7154-201ENST00000620673 73 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 AC019278.1-201ENST00000623516 479 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 AC140479.6-201ENST00000633535 357 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3AP84243 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3AP84243 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.88□□□□□ -1.79
H3F3AP84243 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3AP84243 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3AP84243 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
H3F3AP84243 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3AP84243 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3AP84243 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.87□□□□□ -1.79
H3F3AP84243 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3AP84243 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3AP84243 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3AP84243 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3AP84243 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
H3F3AP84243 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3AP84243 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
H3F3AP84243 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3AP84243 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
H3F3AP84243 RNA5SP175-201ENST00000364275 119 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 RNA5SP509-201ENST00000364577 119 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 OR13C3-201ENST00000374781 1108 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 MIR1911-201ENST00000410783 80 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 FAR2P2-201ENST00000413041 594 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.87□□□□□ -1.79
H3F3AP84243 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 AL592293.2-201ENST00000422292 996 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 EIF1P3-201ENST00000423841 334 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 FAR2P4-202ENST00000425399 584 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 AL157831.1-201ENST00000426134 473 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.87□□□□□ -1.79
H3F3AP84243 RPL23AP52-201ENST00000439311 478 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 GEMIN8P3-201ENST00000445417 720 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 TPT1P13-201ENST00000449760 499 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 ABCF2P2-201ENST00000450549 296 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.87□□□□□ -1.79
H3F3AP84243 RPL23AP81-201ENST00000455252 467 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 AC011276.1-201ENST00000469688 323 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.87□□□□□ -1.79
H3F3AP84243 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 RNA5SP73-201ENST00000516744 108 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 AC008694.2-201ENST00000517591 306 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.87□□□□□ -1.79
H3F3AP84243 AC034205.1-201ENST00000520621 638 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 C1GALT1P3-201ENST00000522049 819 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 PHBP17-201ENST00000528576 541 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 TRAV8-5-201ENST00000537369 341 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 AC069240.1-201ENST00000548774 375 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 AL354984.3-201ENST00000604803 325 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 AL138721.1-201ENST00000616756 179 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.87□□□□□ -1.79
H3F3AP84243 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.87□□□□□ -1.79
H3F3AP84243 RMST_9.1-201ENST00000619945 193 ntBASIC3.87□□□□□ -1.79
H3F3AP84243 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.87□□□□□ -1.79
H3F3AP84243 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
H3F3AP84243 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
H3F3AP84243 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3AP84243 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3F3AP84243 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.87□□□□□ -1.79
H3F3AP84243 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.87□□□□□ -1.79
H3F3AP84243 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.86□□□□□ -1.79
H3F3AP84243 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
H3F3AP84243 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 AC074029.4-201ENST00000624796 1859 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AC018529.3-201ENST00000624212 2254 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
H3F3AP84243 OR4K17-201ENST00000315543 1032 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
H3F3AP84243 SNORD66.1-201ENST00000391230 76 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.86□□□□□ -1.79
H3F3AP84243 RPL23AP48-201ENST00000406913 488 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 RN7SKP216-201ENST00000411050 312 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AC098592.2-201ENST00000413158 265 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.86□□□□□ -1.79
H3F3AP84243 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.86□□□□□ -1.79
H3F3AP84243 AL807761.1-201ENST00000417622 171 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 RBMY1KP-201ENST00000423480 476 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.86□□□□□ -1.79
H3F3AP84243 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.86□□□□□ -1.79
H3F3AP84243 RPS20P1-201ENST00000434853 354 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AL353748.1-201ENST00000440753 474 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms