Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.53□□□□□ -1.68
CBX1P83916 RPL30P2-201ENST00000414021 291 ntBASIC4.53□□□□□ -1.68
CBX1P83916 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.53□□□□□ -1.68
CBX1P83916 AC244453.4-201ENST00000419150 388 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.53□□□□□ -1.68
CBX1P83916 AC048351.1-201ENST00000420064 602 ntBASIC4.53□□□□□ -1.68
CBX1P83916 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.53□□□□□ -1.68
CBX1P83916 AL606490.7-201ENST00000433136 191 ntBASIC4.53□□□□□ -1.68
CBX1P83916 CYCSP12-201ENST00000437729 300 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.53□□□□□ -1.68
CBX1P83916 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.53□□□□□ -1.68
CBX1P83916 AL157827.1-201ENST00000447622 132 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AL627224.1-201ENST00000448334 444 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AL606490.1-201ENST00000452266 765 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.53□□□□□ -1.68
CBX1P83916 PPIAP19-201ENST00000486414 492 ntBASIC4.53□□□□□ -1.68
CBX1P83916 NIPA2P2-201ENST00000496376 1083 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AC068305.1-201ENST00000497406 726 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AC021087.2-201ENST00000504656 1203 ntBASIC4.53□□□□□ -1.68
CBX1P83916 HPRT1P2-201ENST00000505250 544 ntBASIC4.53□□□□□ -1.68
CBX1P83916 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.53□□□□□ -1.68
CBX1P83916 AC021146.1-201ENST00000511202 716 ntBASIC4.53□□□□□ -1.68
CBX1P83916 USP9YP5-201ENST00000511770 630 ntBASIC4.53□□□□□ -1.68
CBX1P83916 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.53□□□□□ -1.68
CBX1P83916 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.53□□□□□ -1.68
CBX1P83916 AC018552.3-201ENST00000567416 561 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.53□□□□□ -1.68
CBX1P83916 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.53□□□□□ -1.68
CBX1P83916 AP003392.5-201ENST00000607857 415 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AC084036.1-201ENST00000609190 508 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AC116447.1-201ENST00000613153 453 ntBASIC4.53□□□□□ -1.68
CBX1P83916 AC126175.1-201ENST00000617041 758 ntBASIC4.53□□□□□ -1.68
CBX1P83916 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.53□□□□□ -1.68
CBX1P83916 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CBX1P83916 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CBX1P83916 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.53□□□□□ -1.68
CBX1P83916 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CBX1P83916 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.53□□□□□ -1.68
CBX1P83916 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CBX1P83916 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX1P83916 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CBX1P83916 ASNSP1-204ENST00000641977 1664 ntBASIC4.52□□□□□ -1.69
CBX1P83916 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CBX1P83916 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.52□□□□□ -1.69
CBX1P83916 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CBX1P83916 RNA5SP435-201ENST00000364044 108 ntBASIC4.52□□□□□ -1.69
CBX1P83916 RN7SKP124-201ENST00000364730 341 ntBASIC4.52□□□□□ -1.69
CBX1P83916 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX1P83916 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CBX1P83916 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CBX1P83916 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CBX1P83916 SNORD66.1-201ENST00000391230 76 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AL031985.1-201ENST00000392713 418 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX1P83916 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.52□□□□□ -1.69
CBX1P83916 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX1P83916 RWDD4P2-201ENST00000426392 563 ntBASIC4.52□□□□□ -1.69
CBX1P83916 VDAC1P6-201ENST00000430062 855 ntBASIC4.52□□□□□ -1.69
CBX1P83916 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX1P83916 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.52□□□□□ -1.69
CBX1P83916 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX1P83916 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX1P83916 MORF4L1P4-201ENST00000450245 976 ntBASIC4.52□□□□□ -1.69
CBX1P83916 EIF4A1P11-201ENST00000451239 222 ntBASIC4.52□□□□□ -1.69
CBX1P83916 SETP20-201ENST00000457046 852 ntBASIC4.52□□□□□ -1.69
CBX1P83916 RPL23AP56-201ENST00000460778 453 ntBASIC4.52□□□□□ -1.69
CBX1P83916 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CBX1P83916 RWDD4P1-201ENST00000488019 565 ntBASIC4.52□□□□□ -1.69
CBX1P83916 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CBX1P83916 AC020593.1-201ENST00000507399 299 ntBASIC4.52□□□□□ -1.69
CBX1P83916 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CBX1P83916 RNU6-347P-201ENST00000516658 105 ntBASIC4.52□□□□□ -1.69
CBX1P83916 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX1P83916 AC090819.1-201ENST00000523800 1111 ntBASIC4.52□□□□□ -1.69
CBX1P83916 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX1P83916 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX1P83916 AC069366.1-201ENST00000583159 838 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX1P83916 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CBX1P83916 AC244505.7-201ENST00000599675 272 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AC020910.2-201ENST00000603635 610 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AC010200.2-201ENST00000605098 235 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX1P83916 AC004477.3-201ENST00000614061 590 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AC008121.2-201ENST00000614647 523 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AC007204.2-201ENST00000615022 616 ntBASIC4.52□□□□□ -1.69
CBX1P83916 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AC090527.3-201ENST00000619041 548 ntBASIC4.52□□□□□ -1.69
CBX1P83916 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CBX1P83916 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX1P83916 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CBX1P83916 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.52□□□□□ -1.69
CBX1P83916 OR5AC4P-202ENST00000642086 985 ntBASIC4.52□□□□□ -1.69
CBX1P83916 AC092162.3-201ENST00000624511 1624 ntBASIC4.52□□□□□ -1.69
CBX1P83916 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CBX1P83916 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CBX1P83916 ASNSP1-201ENST00000518311 1939 ntBASIC4.52□□□□□ -1.69
CBX1P83916 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CBX1P83916 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms