Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AC015804.1-201ENST00000622935 435 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AP000648.2-201ENST00000624182 404 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.15□□□□□ -1.75
CX3CL1P78423 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AC135068.12-201ENST00000637370 931 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CX3CL1P78423 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CX3CL1P78423 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 AL355578.1-201ENST00000607405 1328 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AC005332.5-201ENST00000591222 2919 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC005261.4-201ENST00000600047 1385 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AL049737.1-201ENST00000413920 1403 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC099786.3-201ENST00000565735 1410 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 SGO1P1-201ENST00000603525 1447 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CX3CL1P78423 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CX3CL1P78423 U3.3-201ENST00000362986 216 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 RNA5SP90-201ENST00000364801 99 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC092642.1-201ENST00000392417 425 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC005522.1-201ENST00000395416 346 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AL079342.2-201ENST00000403367 482 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 OR2AH1P-201ENST00000425717 928 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.14□□□□□ -1.75
CX3CL1P78423 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.14□□□□□ -1.75
CX3CL1P78423 SNORD11.1-201ENST00000459482 85 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 RPS21P4-201ENST00000487122 248 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.14□□□□□ -1.75
CX3CL1P78423 GTF2F2P1-201ENST00000511083 675 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.14□□□□□ -1.75
CX3CL1P78423 RFPL4AP5-201ENST00000514977 504 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC138938.1-201ENST00000515431 782 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 RNU6-311P-201ENST00000516224 102 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.14□□□□□ -1.75
CX3CL1P78423 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.14□□□□□ -1.75
CX3CL1P78423 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 MIR4666A-201ENST00000580160 79 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AL020997.3-201ENST00000602843 359 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AL512329.2-201ENST00000607350 548 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AL138478.1-201ENST00000612252 832 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 MIR6862-1-201ENST00000613016 70 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC022467.1-201ENST00000614738 749 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 MIR6862-2-201ENST00000614755 70 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC118658.2-201ENST00000618697 459 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC006386.1-201ENST00000619436 415 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC015871.5-202ENST00000623252 701 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AP000770.2-201ENST00000623694 100 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 OR1S1-201ENST00000624470 978 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC009229.4-201ENST00000623854 1947 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 AC006210.2-201ENST00000367074 1545 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 MTCO1P11-201ENST00000429111 1528 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.14□□□□□ -1.75
CX3CL1P78423 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CX3CL1P78423 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.14□□□□□ -1.75
CX3CL1P78423 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CL1P78423 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CL1P78423 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CL1P78423 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CL1P78423 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms