Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
RAE1P78406 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.9□□□□□ -1.62
RAE1P78406 SGO1P1-201ENST00000603525 1447 ntBASIC4.9□□□□□ -1.62
RAE1P78406 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RAE1P78406 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RAE1P78406 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.9□□□□□ -1.62
RAE1P78406 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RAE1P78406 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RAE1P78406 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.9□□□□□ -1.62
RAE1P78406 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RAE1P78406 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
RAE1P78406 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.9□□□□□ -1.63
RAE1P78406 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RAE1P78406 RN7SKP186-201ENST00000365371 303 ntBASIC4.9□□□□□ -1.63
RAE1P78406 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.9□□□□□ -1.63
RAE1P78406 MIR1302-8-201ENST00000408342 128 ntBASIC4.9□□□□□ -1.63
RAE1P78406 OR3A2-201ENST00000408891 1076 ntBASIC4.9□□□□□ -1.63
RAE1P78406 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.9□□□□□ -1.63
RAE1P78406 MORF4L1P6-201ENST00000418771 268 ntBASIC4.9□□□□□ -1.63
RAE1P78406 USP9YP26-201ENST00000421008 661 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.9□□□□□ -1.63
RAE1P78406 AL365203.2-201ENST00000423444 196 ntBASIC4.9□□□□□ -1.63
RAE1P78406 MTND4P20-201ENST00000424125 869 ntBASIC4.9□□□□□ -1.63
RAE1P78406 BX119904.4-201ENST00000424402 301 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AC108075.1-201ENST00000424692 529 ntBASIC4.9□□□□□ -1.63
RAE1P78406 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.9□□□□□ -1.63
RAE1P78406 AL121776.1-201ENST00000429337 372 ntBASIC4.9□□□□□ -1.63
RAE1P78406 USP9YP31-201ENST00000431405 881 ntBASIC4.9□□□□□ -1.63
RAE1P78406 CFL1P1-202ENST00000432948 411 ntBASIC4.9□□□□□ -1.63
RAE1P78406 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.9□□□□□ -1.63
RAE1P78406 AC092393.1-201ENST00000439625 742 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.9□□□□□ -1.63
RAE1P78406 RPL23AP76-201ENST00000441860 458 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.9□□□□□ -1.63
RAE1P78406 TCEA1P3-201ENST00000443005 880 ntBASIC4.9□□□□□ -1.63
RAE1P78406 SIAH1P1-201ENST00000479411 923 ntBASIC4.9□□□□□ -1.63
RAE1P78406 RPS4XP1-201ENST00000482189 787 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AC104109.1-201ENST00000498563 436 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.9□□□□□ -1.63
RAE1P78406 RPF2P2-201ENST00000504693 896 ntBASIC4.9□□□□□ -1.63
RAE1P78406 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RAE1P78406 AC098799.3-201ENST00000506095 438 ntBASIC4.9□□□□□ -1.63
RAE1P78406 MTND1P22-201ENST00000510572 951 ntBASIC4.9□□□□□ -1.63
RAE1P78406 OR5H4P-201ENST00000510851 923 ntBASIC4.9□□□□□ -1.63
RAE1P78406 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.9□□□□□ -1.63
RAE1P78406 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.9□□□□□ -1.63
RAE1P78406 HMGB1P23-201ENST00000518743 568 ntBASIC4.9□□□□□ -1.63
RAE1P78406 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.9□□□□□ -1.63
RAE1P78406 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.9□□□□□ -1.63
RAE1P78406 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.9□□□□□ -1.63
RAE1P78406 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.9□□□□□ -1.63
RAE1P78406 AP001317.1-201ENST00000531194 960 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AP000619.3-201ENST00000535634 1127 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RAE1P78406 AC006349.1-201ENST00000555526 235 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.9□□□□□ -1.63
RAE1P78406 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.9□□□□□ -1.63
RAE1P78406 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.9□□□□□ -1.63
RAE1P78406 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.9□□□□□ -1.63
RAE1P78406 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.9□□□□□ -1.63
RAE1P78406 AL022161.1-201ENST00000604390 213 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AC018695.5-201ENST00000605872 315 ntBASIC4.9□□□□□ -1.63
RAE1P78406 uc_338.9-201ENST00000617424 182 ntBASIC4.9□□□□□ -1.63
RAE1P78406 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.9□□□□□ -1.63
RAE1P78406 AC135068.12-201ENST00000637370 931 ntBASIC4.9□□□□□ -1.63
RAE1P78406 AC073869.10-201ENST00000642016 354 ntBASIC4.9□□□□□ -1.63
RAE1P78406 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RAE1P78406 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RAE1P78406 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.9□□□□□ -1.63
RAE1P78406 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RAE1P78406 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RAE1P78406 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RAE1P78406 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RAE1P78406 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
RAE1P78406 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.89□□□□□ -1.63
RAE1P78406 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.89□□□□□ -1.63
RAE1P78406 AC053481.2-202ENST00000582394 1500 ntBASIC4.89□□□□□ -1.63
RAE1P78406 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RAE1P78406 HMGB1P5-201ENST00000255320 642 ntBASIC4.89□□□□□ -1.63
RAE1P78406 RN7SKP160-201ENST00000363804 340 ntBASIC4.89□□□□□ -1.63
RAE1P78406 MIR143-201ENST00000385300 106 ntBASIC4.89□□□□□ -1.63
RAE1P78406 U3.25-201ENST00000391209 220 ntBASIC4.89□□□□□ -1.63
RAE1P78406 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.89□□□□□ -1.63
RAE1P78406 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.89□□□□□ -1.63
RAE1P78406 QRSL1P2-201ENST00000418582 964 ntBASIC4.89□□□□□ -1.63
RAE1P78406 CHEK2P5-201ENST00000423877 246 ntBASIC4.89□□□□□ -1.63
RAE1P78406 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.89□□□□□ -1.63
RAE1P78406 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.89□□□□□ -1.63
RAE1P78406 AC005345.1-201ENST00000431868 217 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms