Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.79□□□□□ -1.8
UBA52P62987 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.79□□□□□ -1.8
UBA52P62987 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UBA52P62987 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBA52P62987 SNORA71.2-201ENST00000364941 134 ntBASIC3.79□□□□□ -1.8
UBA52P62987 RNA5SP151-201ENST00000365632 117 ntBASIC3.79□□□□□ -1.8
UBA52P62987 MIR137-201ENST00000385223 102 ntBASIC3.79□□□□□ -1.8
UBA52P62987 AL512430.2-201ENST00000406786 339 ntBASIC3.79□□□□□ -1.8
UBA52P62987 RN7SKP27-201ENST00000410684 333 ntBASIC3.79□□□□□ -1.8
UBA52P62987 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.79□□□□□ -1.8
UBA52P62987 RPS17P8-201ENST00000434525 335 ntBASIC3.79□□□□□ -1.8
UBA52P62987 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.79□□□□□ -1.8
UBA52P62987 AC011276.1-201ENST00000469688 323 ntBASIC3.79□□□□□ -1.8
UBA52P62987 AC010618.1-201ENST00000469924 477 ntBASIC3.79□□□□□ -1.8
UBA52P62987 AC135999.1-201ENST00000478962 479 ntBASIC3.79□□□□□ -1.8
UBA52P62987 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.79□□□□□ -1.8
UBA52P62987 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.79□□□□□ -1.8
UBA52P62987 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBA52P62987 NDUFB4P12-201ENST00000513465 390 ntBASIC3.79□□□□□ -1.8
UBA52P62987 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.79□□□□□ -1.8
UBA52P62987 AL109766.1-201ENST00000555080 552 ntBASIC3.79□□□□□ -1.8
UBA52P62987 AC084783.1-201ENST00000565846 910 ntBASIC3.79□□□□□ -1.8
UBA52P62987 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
UBA52P62987 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.79□□□□□ -1.8
UBA52P62987 RN7SL652P-201ENST00000577769 300 ntBASIC3.79□□□□□ -1.8
UBA52P62987 MIR1254-2-201ENST00000579553 63 ntBASIC3.79□□□□□ -1.8
UBA52P62987 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.79□□□□□ -1.8
UBA52P62987 HMGB1P50-201ENST00000605814 607 ntBASIC3.79□□□□□ -1.8
UBA52P62987 AC100847.1-201ENST00000611316 481 ntBASIC3.79□□□□□ -1.8
UBA52P62987 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.79□□□□□ -1.8
UBA52P62987 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBA52P62987 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.79□□□□□ -1.8
UBA52P62987 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBA52P62987 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBA52P62987 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
UBA52P62987 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBA52P62987 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBA52P62987 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBA52P62987 AL031119.1-201ENST00000404707 1879 ntBASIC3.78□□□□□ -1.8
UBA52P62987 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UBA52P62987 RNA5SP388-201ENST00000362584 119 ntBASIC3.78□□□□□ -1.8
UBA52P62987 RNA5SP509-201ENST00000364577 119 ntBASIC3.78□□□□□ -1.8
UBA52P62987 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
UBA52P62987 RNU1-82P-201ENST00000390851 165 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AL603766.1-201ENST00000407763 664 ntBASIC3.78□□□□□ -1.8
UBA52P62987 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.78□□□□□ -1.8
UBA52P62987 RN7SKP56-201ENST00000410513 331 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AL591848.1-201ENST00000413092 322 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UBA52P62987 AC140479.3-201ENST00000418944 1126 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.78□□□□□ -1.8
UBA52P62987 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.78□□□□□ -1.8
UBA52P62987 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.78□□□□□ -1.8
UBA52P62987 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.78□□□□□ -1.8
UBA52P62987 UBA52P3-201ENST00000491303 382 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AC017037.1-201ENST00000508460 471 ntBASIC3.78□□□□□ -1.8
UBA52P62987 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
UBA52P62987 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.78□□□□□ -1.8
UBA52P62987 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.78□□□□□ -1.8
UBA52P62987 AP001781.1-201ENST00000530977 207 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.78□□□□□ -1.8
UBA52P62987 MIR3160-1-201ENST00000577972 85 ntBASIC3.78□□□□□ -1.8
UBA52P62987 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.78□□□□□ -1.8
UBA52P62987 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.78□□□□□ -1.8
UBA52P62987 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.78□□□□□ -1.8
UBA52P62987 AC073091.2-201ENST00000603205 907 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AC008782.1-201ENST00000603386 430 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.78□□□□□ -1.8
UBA52P62987 AP002360.3-201ENST00000607673 710 ntBASIC3.78□□□□□ -1.8
UBA52P62987 OR7A19P-201ENST00000608051 733 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AL121890.3-201ENST00000618494 516 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AP005019.3-201ENST00000620418 560 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AC011944.2-201ENST00000624440 683 ntBASIC3.78□□□□□ -1.8
UBA52P62987 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.78□□□□□ -1.8
UBA52P62987 AC009951.1-201ENST00000623674 2614 ntBASIC3.78□□□□□ -1.8
UBA52P62987 AL450326.2-201ENST00000421913 1962 ntBASIC3.78□□□□□ -1.8
UBA52P62987 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.78□□□□□ -1.81
UBA52P62987 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBA52P62987 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.77□□□□□ -1.81
UBA52P62987 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBA52P62987 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBA52P62987 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
UBA52P62987 FCF1P5-201ENST00000406490 482 ntBASIC3.77□□□□□ -1.81
UBA52P62987 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.77□□□□□ -1.81
UBA52P62987 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.77□□□□□ -1.81
UBA52P62987 AC097523.2-201ENST00000435551 652 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.77□□□□□ -1.81
UBA52P62987 H2AFZP5-201ENST00000446960 382 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC239367.2-201ENST00000447309 705 ntBASIC3.77□□□□□ -1.81
UBA52P62987 MTND2P25-201ENST00000449028 610 ntBASIC3.77□□□□□ -1.81
UBA52P62987 NPM1P39-201ENST00000449818 867 ntBASIC3.77□□□□□ -1.81
UBA52P62987 HMGB3P22-202ENST00000451823 572 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.77□□□□□ -1.81
UBA52P62987 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
UBA52P62987 AC025674.1-201ENST00000507074 324 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC106806.2-201ENST00000509365 500 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC007016.1-201ENST00000512110 244 ntBASIC3.77□□□□□ -1.81
UBA52P62987 MIR2114-201ENST00000516645 80 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms