Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S1P61966 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S1P61966 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
AP1S1P61966 AC009951.1-201ENST00000623674 2614 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
AP1S1P61966 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S1P61966 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
AP1S1P61966 RNU1-15P-201ENST00000353977 144 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 MIR383-201ENST00000362257 73 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
AP1S1P61966 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.31□□□□□ -1.72
AP1S1P61966 AL161631.1-201ENST00000417933 486 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 C4BPAP2-201ENST00000428434 478 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.31□□□□□ -1.72
AP1S1P61966 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S1P61966 AC026979.1-201ENST00000492525 396 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 AC108475.1-201ENST00000507880 950 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 AC021146.3-201ENST00000511911 260 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 KCTD9P2-201ENST00000512203 1013 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 RNA5SP519-201ENST00000516480 119 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S1P61966 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.31□□□□□ -1.72
AP1S1P61966 TVP23BP1-201ENST00000557500 617 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 KPNA2P3-201ENST00000584190 848 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S1P61966 AC005962.2-201ENST00000611427 652 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 MLECP1-201ENST00000615893 709 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S1P61966 MAPK10-304ENST00000641341 3984 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 XKRY2-202ENST00000623874 1581 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 XKRY-202ENST00000624960 1581 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S1P61966 ASNSP1-201ENST00000518311 1939 ntBASIC4.31□□□□□ -1.72
AP1S1P61966 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S1P61966 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S1P61966 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
AP1S1P61966 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.3□□□□□ -1.72
AP1S1P61966 AC067945.1-201ENST00000342609 618 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 RPL32P3-201ENST00000359025 275 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 GCNT6-201ENST00000379591 934 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 RNA5SP36-201ENST00000410197 133 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S1P61966 PRELID3BP10-201ENST00000431957 584 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 BTF3P10-201ENST00000433415 495 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 TPT1P12-201ENST00000448968 492 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S1P61966 CCDC75P1-201ENST00000469247 791 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 AC083829.1-201ENST00000503756 657 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.3□□□□□ -1.72
AP1S1P61966 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 VWA8P1-201ENST00000510889 176 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 RN7SKP122-201ENST00000515923 296 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 AC138701.1-201ENST00000524329 714 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S1P61966 MIR3138-201ENST00000585238 82 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 AL161729.3-201ENST00000603533 673 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S1P61966 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S1P61966 MIR6716-201ENST00000613413 80 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S1P61966 AC006338.2-201ENST00000616864 791 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.3□□□□□ -1.72
AP1S1P61966 MIR6758-201ENST00000620653 63 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 AC008013.2-202ENST00000637965 364 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 AC138627.1-204ENST00000641894 765 ntBASIC4.3□□□□□ -1.72
AP1S1P61966 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S1P61966 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
AP1S1P61966 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S1P61966 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S1P61966 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S1P61966 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
AP1S1P61966 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S1P61966 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S1P61966 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S1P61966 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
AP1S1P61966 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S1P61966 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S1P61966 FAM3C2-201ENST00000312214 681 ntBASIC4.29□□□□□ -1.72
AP1S1P61966 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S1P61966 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S1P61966 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S1P61966 VN1R8P-201ENST00000407739 893 ntBASIC4.29□□□□□ -1.72
AP1S1P61966 AL603766.1-201ENST00000407763 664 ntBASIC4.29□□□□□ -1.72
AP1S1P61966 RPS23P10-201ENST00000416185 486 ntBASIC4.29□□□□□ -1.72
AP1S1P61966 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S1P61966 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms