Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
SUMO3P55854 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 Y_RNA.25-201ENST00000362528 102 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SUMO3P55854 RNU6-444P-201ENST00000383988 108 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 FABP12P1-201ENST00000401911 322 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AL078604.1-201ENST00000404609 466 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 RNA5SP178-201ENST00000410380 128 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 TPT1P2-201ENST00000413105 503 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 RBMY2KP-201ENST00000418221 992 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 QRSL1P2-201ENST00000418582 964 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.05□□□□□ -1.6
SUMO3P55854 BX276092.6-201ENST00000430476 250 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 RPL12P17-201ENST00000432393 498 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AC138761.5-201ENST00000433967 325 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AC099670.2-201ENST00000435130 321 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 MTND4P32-201ENST00000437189 1237 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 AL591503.2-201ENST00000442314 1005 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AL161636.2-201ENST00000445179 927 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AL591363.1-201ENST00000450091 483 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AZGP1P2-201ENST00000454506 345 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 MTCO3P11-201ENST00000455103 774 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 BX276092.8-201ENST00000455722 250 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 PPIAP21-201ENST00000464473 501 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 CCDC75P1-201ENST00000469247 791 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 SYPL1P1-201ENST00000473622 768 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 RN7SL583P-201ENST00000475692 287 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 PPIAP19-201ENST00000486414 492 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 AC112191.2-201ENST00000522428 333 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 OR5AK1P-201ENST00000524837 922 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.05□□□□□ -1.6
SUMO3P55854 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SUMO3P55854 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.05□□□□□ -1.6
SUMO3P55854 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 AC015726.1-201ENST00000602353 681 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.05□□□□□ -1.6
SUMO3P55854 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 AC072039.2-201ENST00000608883 439 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 RNA5SP440-201ENST00000612665 119 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AL122125.1-201ENST00000616999 600 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AL136981.2-201ENST00000617319 734 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 uc_338.7-201ENST00000621834 124 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AC068137.4-201ENST00000638485 296 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SUMO3P55854 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SUMO3P55854 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SUMO3P55854 SAMMSON-213ENST00000641336 1521 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SUMO3P55854 AC138907.8-201ENST00000623981 2256 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SUMO3P55854 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SUMO3P55854 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.05□□□□□ -1.6
SUMO3P55854 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SUMO3P55854 MRRFP1-201ENST00000435941 1675 ntBASIC5.05□□□□□ -1.6
SUMO3P55854 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.05□□□□□ -1.6
SUMO3P55854 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SUMO3P55854 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.05□□□□□ -1.6
SUMO3P55854 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SUMO3P55854 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SUMO3P55854 AL445523.1-201ENST00000451184 1362 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
SUMO3P55854 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.04□□□□□ -1.6
SUMO3P55854 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SUMO3P55854 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SUMO3P55854 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SUMO3P55854 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 RNU6-553P-201ENST00000364047 96 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 SNORD56.6-201ENST00000384569 71 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 MIR506-201ENST00000384998 124 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 SNORA17A-201ENST00000391185 133 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 RPL31P52-201ENST00000407532 367 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 RN7SKP293-201ENST00000411389 296 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms