Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.27□□□□□ -1.73
PKNOX1P55347 AC006065.1-201ENST00000422539 802 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 RBMY1KP-201ENST00000423480 476 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AL132765.1-201ENST00000434165 553 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AL359265.2-201ENST00000434367 631 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 PA2G4P6-201ENST00000438325 1197 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 ARL5AP3-201ENST00000439327 386 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 Z99127.2-201ENST00000441426 334 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 CASP3P1-201ENST00000446037 609 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.27□□□□□ -1.73
PKNOX1P55347 RPL7P61-201ENST00000451721 751 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AC133473.1-201ENST00000455173 299 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AC010326.1-201ENST00000462726 602 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.27□□□□□ -1.73
PKNOX1P55347 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.27□□□□□ -1.73
PKNOX1P55347 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.27□□□□□ -1.73
PKNOX1P55347 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.27□□□□□ -1.73
PKNOX1P55347 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.27□□□□□ -1.73
PKNOX1P55347 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.27□□□□□ -1.73
PKNOX1P55347 AC124068.1-201ENST00000563131 678 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.27□□□□□ -1.73
PKNOX1P55347 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.27□□□□□ -1.73
PKNOX1P55347 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.27□□□□□ -1.73
PKNOX1P55347 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.27□□□□□ -1.73
PKNOX1P55347 AC020634.1-201ENST00000608701 549 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AP000894.4-201ENST00000610185 483 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AL445528.2-201ENST00000620582 470 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.27□□□□□ -1.73
PKNOX1P55347 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.27□□□□□ -1.73
PKNOX1P55347 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.27□□□□□ -1.73
PKNOX1P55347 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PKNOX1P55347 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PKNOX1P55347 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.27□□□□□ -1.73
PKNOX1P55347 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 BX005019.1-201ENST00000561881 1810 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.27□□□□□ -1.73
PKNOX1P55347 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PKNOX1P55347 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.27□□□□□ -1.73
PKNOX1P55347 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKNOX1P55347 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PKNOX1P55347 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKNOX1P55347 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PKNOX1P55347 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKNOX1P55347 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKNOX1P55347 AC090971.4-201ENST00000560291 1800 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.26□□□□□ -1.73
PKNOX1P55347 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKNOX1P55347 SNORD113.2-201ENST00000364166 89 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKNOX1P55347 MIR7-1-201ENST00000384871 110 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 MIR3065-201ENST00000390137 79 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 RNA5SP39-201ENST00000411245 120 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.26□□□□□ -1.73
PKNOX1P55347 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKNOX1P55347 NANOGP6-201ENST00000429190 847 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 ELOCP18-201ENST00000434209 337 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.26□□□□□ -1.73
PKNOX1P55347 RPL36AP15-201ENST00000444514 266 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.26□□□□□ -1.73
PKNOX1P55347 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.26□□□□□ -1.73
PKNOX1P55347 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.26□□□□□ -1.73
PKNOX1P55347 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.26□□□□□ -1.73
PKNOX1P55347 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PKNOX1P55347 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.26□□□□□ -1.73
PKNOX1P55347 OR7H2P-201ENST00000513483 306 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 IGHV3-63-201ENST00000518422 341 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKNOX1P55347 AP001781.1-201ENST00000530977 207 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 AL352979.3-201ENST00000553515 247 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.26□□□□□ -1.73
PKNOX1P55347 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.26□□□□□ -1.73
PKNOX1P55347 AC016180.1-201ENST00000567945 403 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.26□□□□□ -1.73
PKNOX1P55347 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.26□□□□□ -1.73
PKNOX1P55347 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PKNOX1P55347 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.26□□□□□ -1.73
PKNOX1P55347 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PKNOX1P55347 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PKNOX1P55347 CASC19-284ENST00000642142 1868 ntBASIC4.26□□□□□ -1.73
PKNOX1P55347 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.26□□□□□ -1.73
PKNOX1P55347 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PKNOX1P55347 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PKNOX1P55347 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PKNOX1P55347 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PKNOX1P55347 SNORA70F-201ENST00000384142 135 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 NCSTNP1-201ENST00000406229 144 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 AL590806.1-201ENST00000415818 853 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.25□□□□□ -1.73
PKNOX1P55347 AC099336.2-201ENST00000422457 254 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 OR6K4P-201ENST00000423179 955 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.25□□□□□ -1.73
PKNOX1P55347 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.25□□□□□ -1.73
PKNOX1P55347 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms