Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SNORD96B-201ENST00000386148 79 ntBASIC4.65□□□□□ -1.67
CDH13P55290 AP002530.1-201ENST00000405705 684 ntBASIC4.65□□□□□ -1.67
CDH13P55290 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH13P55290 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH13P55290 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH13P55290 AL355433.1-201ENST00000422804 300 ntBASIC4.65□□□□□ -1.67
CDH13P55290 RPL7P57-201ENST00000423238 740 ntBASIC4.65□□□□□ -1.67
CDH13P55290 AL645608.4-201ENST00000423619 154 ntBASIC4.65□□□□□ -1.67
CDH13P55290 RPS27P18-201ENST00000431701 247 ntBASIC4.65□□□□□ -1.67
CDH13P55290 PPIAP13-201ENST00000434706 478 ntBASIC4.65□□□□□ -1.67
CDH13P55290 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH13P55290 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH13P55290 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH13P55290 AC092647.3-201ENST00000443044 633 ntBASIC4.65□□□□□ -1.67
CDH13P55290 AC068135.1-201ENST00000446164 246 ntBASIC4.65□□□□□ -1.67
CDH13P55290 MTND2P8-201ENST00000450555 1025 ntBASIC4.65□□□□□ -1.67
CDH13P55290 RPS26P39-201ENST00000469206 341 ntBASIC4.65□□□□□ -1.67
CDH13P55290 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH13P55290 RPL23AP37-201ENST00000479658 549 ntBASIC4.65□□□□□ -1.67
CDH13P55290 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH13P55290 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH13P55290 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH13P55290 AC083923.1-201ENST00000523708 376 ntBASIC4.65□□□□□ -1.67
CDH13P55290 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH13P55290 AP003066.2-201ENST00000529375 555 ntBASIC4.65□□□□□ -1.67
CDH13P55290 AC087894.1-201ENST00000538359 518 ntBASIC4.65□□□□□ -1.67
CDH13P55290 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH13P55290 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH13P55290 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH13P55290 AC079075.1-201ENST00000559543 878 ntBASIC4.65□□□□□ -1.67
CDH13P55290 AC020910.3-201ENST00000603701 874 ntBASIC4.65□□□□□ -1.67
CDH13P55290 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH13P55290 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH13P55290 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH13P55290 MTCO1P11-201ENST00000429111 1528 ntBASIC4.65□□□□□ -1.67
CDH13P55290 MTND4P9-201ENST00000507819 1346 ntBASIC4.65□□□□□ -1.67
CDH13P55290 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH13P55290 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH13P55290 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH13P55290 ZNF849P-201ENST00000594711 1566 ntBASIC4.65□□□□□ -1.67
CDH13P55290 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CDH13P55290 AC139713.2-215ENST00000641428 5037 ntBASIC4.64□□□□□ -1.67
CDH13P55290 HSPA8P18-201ENST00000439846 1928 ntBASIC4.64□□□□□ -1.67
CDH13P55290 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH13P55290 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CDH13P55290 AC100871.1-201ENST00000507871 1456 ntBASIC4.64□□□□□ -1.67
CDH13P55290 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH13P55290 AL136164.3-201ENST00000624429 3978 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AC000123.3-201ENST00000624029 4975 ntBASIC4.64□□□□□ -1.67
CDH13P55290 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH13P55290 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDH13P55290 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH13P55290 AL590763.1-201ENST00000398297 1545 ntBASIC4.64□□□□□ -1.67
CDH13P55290 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH13P55290 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH13P55290 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CDH13P55290 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.64□□□□□ -1.67
CDH13P55290 RNU6-603P-201ENST00000411403 107 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AC092745.2-202ENST00000411880 369 ntBASIC4.64□□□□□ -1.67
CDH13P55290 LINC00993-201ENST00000420453 540 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AC115285.1-201ENST00000424879 736 ntBASIC4.64□□□□□ -1.67
CDH13P55290 RPS26P47-201ENST00000427219 348 ntBASIC4.64□□□□□ -1.67
CDH13P55290 NPM1P24-201ENST00000428039 894 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH13P55290 RNF2P1-201ENST00000442955 1010 ntBASIC4.64□□□□□ -1.67
CDH13P55290 EEF1B2P5-201ENST00000444820 548 ntBASIC4.64□□□□□ -1.67
CDH13P55290 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH13P55290 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH13P55290 AC234781.3-201ENST00000452540 973 ntBASIC4.64□□□□□ -1.67
CDH13P55290 OR2AF1P-201ENST00000454899 889 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AC005532.2-201ENST00000467154 373 ntBASIC4.64□□□□□ -1.67
CDH13P55290 RPS4XP18-201ENST00000495480 763 ntBASIC4.64□□□□□ -1.67
CDH13P55290 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH13P55290 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH13P55290 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH13P55290 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH13P55290 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH13P55290 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.64□□□□□ -1.67
CDH13P55290 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH13P55290 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH13P55290 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH13P55290 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.64□□□□□ -1.67
CDH13P55290 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.64□□□□□ -1.67
CDH13P55290 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH13P55290 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH13P55290 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH13P55290 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH13P55290 RN7SL753P-201ENST00000581238 290 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AP002906.1-201ENST00000603405 233 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH13P55290 COX6CP4-201ENST00000605798 228 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AP001521.2-201ENST00000608772 546 ntBASIC4.64□□□□□ -1.67
CDH13P55290 EIF3FP1-201ENST00000613970 806 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AC234782.5-201ENST00000617723 324 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AC022306.3-201ENST00000619930 550 ntBASIC4.64□□□□□ -1.67
CDH13P55290 AL359757.1-201ENST00000623176 255 ntBASIC4.64□□□□□ -1.67
CDH13P55290 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH13P55290 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.64□□□□□ -1.67
CDH13P55290 SMG1P6-201ENST00000532337 2930 ntBASIC4.64□□□□□ -1.67
CDH13P55290 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms