Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MTND1P36-201ENST00000522384 936 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 MORF4L1P3-201ENST00000525966 950 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.9□□□□□ -1.63
LIMK1P53667 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.9□□□□□ -1.63
LIMK1P53667 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.9□□□□□ -1.63
LIMK1P53667 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.9□□□□□ -1.63
LIMK1P53667 AC093510.2-201ENST00000562820 896 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.9□□□□□ -1.63
LIMK1P53667 MIR3908-201ENST00000579798 126 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 ADAD1P2-201ENST00000588476 646 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.9□□□□□ -1.63
LIMK1P53667 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.9□□□□□ -1.63
LIMK1P53667 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.9□□□□□ -1.63
LIMK1P53667 AC100847.1-201ENST00000611316 481 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 AC024941.1-201ENST00000612250 334 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 AL121873.1-201ENST00000616013 524 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.9□□□□□ -1.63
LIMK1P53667 MIR6853-201ENST00000619642 74 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 AL161637.1-201ENST00000622380 412 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.9□□□□□ -1.63
LIMK1P53667 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.9□□□□□ -1.63
LIMK1P53667 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.9□□□□□ -1.63
LIMK1P53667 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LIMK1P53667 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
LIMK1P53667 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
LIMK1P53667 AC108751.5-201ENST00000492880 1336 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LIMK1P53667 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LIMK1P53667 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LIMK1P53667 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 AL731566.1-201ENST00000620490 1937 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LIMK1P53667 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.89□□□□□ -1.63
LIMK1P53667 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 ZNF90P1-201ENST00000480493 1951 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LIMK1P53667 AC008079.2-201ENST00000623543 20396 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 AC104623.2-202ENST00000623477 4002 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 RNA5SP447-201ENST00000363749 119 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 SNORD113.2-201ENST00000364166 89 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.89□□□□□ -1.63
LIMK1P53667 RN7SKP106-201ENST00000410832 272 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 GTF2IP5-201ENST00000414608 731 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 AC104333.2-201ENST00000422630 192 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 MORF4L1P7-201ENST00000426038 703 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.89□□□□□ -1.63
LIMK1P53667 GTF3AP5-201ENST00000442645 697 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 RPL34P26-201ENST00000445636 354 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 RPL7P31-201ENST00000450192 724 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.89□□□□□ -1.63
LIMK1P53667 AC010350.1-201ENST00000504908 231 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.89□□□□□ -1.63
LIMK1P53667 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.89□□□□□ -1.63
LIMK1P53667 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.89□□□□□ -1.63
LIMK1P53667 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.89□□□□□ -1.63
LIMK1P53667 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.89□□□□□ -1.63
LIMK1P53667 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.89□□□□□ -1.63
LIMK1P53667 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.89□□□□□ -1.63
LIMK1P53667 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.89□□□□□ -1.63
LIMK1P53667 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.89□□□□□ -1.63
LIMK1P53667 VN1R85P-201ENST00000601587 426 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 MIR6839-201ENST00000620425 113 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 AC008785.1-201ENST00000624475 456 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 AC080188.3-201ENST00000624842 748 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.89□□□□□ -1.63
LIMK1P53667 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LIMK1P53667 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 AL592148.3-201ENST00000608771 2646 ntBASIC4.89□□□□□ -1.63
LIMK1P53667 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LIMK1P53667 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LIMK1P53667 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LIMK1P53667 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LIMK1P53667 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.88□□□□□ -1.63
LIMK1P53667 AC063976.2-201ENST00000425667 3556 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.88□□□□□ -1.63
LIMK1P53667 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LIMK1P53667 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.88□□□□□ -1.63
LIMK1P53667 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LIMK1P53667 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LIMK1P53667 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LIMK1P53667 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.88□□□□□ -1.63
LIMK1P53667 RN7SKP153-201ENST00000365026 316 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LIMK1P53667 HMGB1P10-201ENST00000395823 563 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 RNU2-17P-201ENST00000410290 190 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 AC013404.1-201ENST00000413068 249 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms